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Aliases for LOC105371291 Gene

Subcategory (RNA class) for LOC105371291 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371291 Gene

  • Uncharacterized LOC105371291 3

External Ids for LOC105371291 Gene

Previous GeneCards Identifiers for LOC105371291 Gene

  • GC16U902157

Summaries for LOC105371291 Gene

GeneCards Summary for LOC105371291 Gene

LOC105371291 (Uncharacterized LOC105371291) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371291 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371291 Gene

Genomics for LOC105371291 Gene

GeneHancer (GH) Regulatory Elements for LOC105371291 Gene

Promoters and enhancers for LOC105371291 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J057605 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE dbSUPER 600.7 -1.6 -1572 6.2 SP1 CEBPG ZNF687 AHR BACH1 MAFK RELA CREM MLLT1 ZNF384 ADGRG1 LOC105371291 ADGRG5 ZNF319 GC16P057594
GH16J057600 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +5.4 5351 4 SP1 CTCF CBFA2T2 CEBPG ZNF687 JUND PPARG CREM MLLT1 RAD21 HMGB3P32 ADGRG3 ADGRG5 GC16P057594 LOC105371291
GH16J057589 Enhancer 1.2 ENCODE dbSUPER 0.4 +15.3 15296 4.1 SP1 ELF3 CTCF ZNF687 CREM ZNF644 RAD21 ZBED1 KAT8 IKZF1 RSPRY1 ENSG00000260927 POLR2C ADGRG3 CCDC102A GC16P057594 LOC105371291 GC16P057566 ADGRG5
GH16J057606 Enhancer 0.6 Ensembl ENCODE dbSUPER 0.7 +2.2 2222 0.7 ADGRG5 HMGB3P32 LOC105371291 GC16P057594
GH16J057588 Enhancer 1 FANTOM5 ENCODE dbSUPER 0.4 +18.4 18359 1.1 IKZF1 IKZF2 ZNF7 DPF2 RUNX3 BCLAF1 BCL11A BATF EBF1 ADGRG1 ADGRG3 ADGRG5 GC16P057594 LOC105371291 GC16P057566
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371291 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371291 Gene

Genomic Locations for LOC105371291 Gene
chr16:57,567,663-57,607,352
(GRCh38/hg38)
Size:
39,690 bases
Orientation:
Minus strand

Genomic View for LOC105371291 Gene

Genes around LOC105371291 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371291 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371291 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371291 Gene

Proteins for LOC105371291 Gene

Post-translational modifications for LOC105371291 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371291 Gene

Domains & Families for LOC105371291 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371291 Gene

Function for LOC105371291 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371291 Gene

Localization for LOC105371291 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371291 Gene

Pathways & Interactions for LOC105371291 Gene

PathCards logo

SuperPathways for LOC105371291 Gene

No Data Available

Interacting Proteins for LOC105371291 Gene

Gene Ontology (GO) - Biological Process for LOC105371291 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371291 Gene

Drugs & Compounds for LOC105371291 Gene

No Compound Related Data Available

Transcripts for LOC105371291 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371291 Gene

No ASD Table

Relevant External Links for LOC105371291 Gene

GeneLoc Exon Structure for
LOC105371291

No data available for mRNA/cDNA for LOC105371291 Gene

Expression for LOC105371291 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371291 Gene

Orthologs for LOC105371291 Gene

No data available for Orthologs and Evolution for LOC105371291 Gene

Paralogs for LOC105371291 Gene

No data available for Paralogs for LOC105371291 Gene

Variants for LOC105371291 Gene

Sequence variations from dbSNP and Humsavar for LOC105371291 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000081162 -- 57,586,123(-) T/C genic_upstream_transcript_variant, intron_variant
rs1000183279 -- 57,591,676(-) G/T genic_upstream_transcript_variant, intron_variant
rs1000255370 -- 57,591,367(-) T/C genic_upstream_transcript_variant, intron_variant
rs1000365830 -- 57,597,938(-) A/T genic_upstream_transcript_variant, intron_variant
rs1000421840 -- 57,586,328(-) T/C genic_upstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371291 Gene

Disorders for LOC105371291 Gene

No disorders were found for LOC105371291 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371291 Gene

Publications for LOC105371291 Gene

No publications were found for LOC105371291 Gene.

No data available for External Links for LOC105371291 Gene

Products for LOC105371291 Gene

Sources for LOC105371291 Gene

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