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Aliases for LOC105371286 Gene

Subcategory (RNA class) for LOC105371286 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371286 Gene

  • Uncharacterized LOC105371286 3
  • AC106779.1 5

External Ids for LOC105371286 Gene

Previous GeneCards Identifiers for LOC105371286 Gene

  • GC16U901878

Summaries for LOC105371286 Gene

GeneCards Summary for LOC105371286 Gene

LOC105371286 (Uncharacterized LOC105371286) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371286 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371286 Gene

Genomics for LOC105371286 Gene

GeneHancer (GH) Regulatory Elements for LOC105371286 Gene

Promoters and enhancers for LOC105371286 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J056728 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 650.7 +0.1 59 2.4 PKNOX1 MLX ARID4B SIN3A DMAP1 YY1 SLC30A9 POLR2B ZNF207 ZNF143 NUP93 LOC105371286 LOC105371287
GH16J057626 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 30.9 -898.8 -898770 4.8 HDGF PKNOX1 ARNT SIN3A YBX1 ZNF2 ZNF766 ZNF416 ZNF207 ZNF548 ADGRG1 RSPRY1 LOC101927556 POLR2C NUP93 LOC105371286 SETD6 LOC100421594 LOC100125393 ENSG00000260148
GH16J057482 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE 13.1 -754.8 -754806 5.3 HDGF FOXA2 MLX ARID4B SIN3A SLC30A9 ZNF213 ZNF143 ZNF263 SP5 DOK4 POLR2C CIAPIN1 COQ9 LOC105371286 RSPRY1 CX3CL1 CCL22 USB1 PIR51542
GH16J056420 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 13.1 +306.3 306336 6.3 ATF1 FOXA2 ARNT ARID4B SIN3A ZNF48 YY1 GLIS2 GATA2 ZNF143 PIR36581 PIR43832 GC16M056424 AMFR BBS2 OGFOD1 LOC105371286 MT4 PIR52158
GH16J056930 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 11.1 -205.5 -205504 10.1 CLOCK MLX FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 ZNF416 ZNF143 HERPUD1 RSPRY1 NUP93 NUDT21 POLR2C CETP SLC12A3 LOC105371286 ENSG00000261270 NLRC5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371286 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371286 Gene

Genomic Locations for LOC105371286 Gene
chr16:56,708,772-56,730,015
(GRCh38/hg38)
Size:
21,244 bases
Orientation:
Minus strand
chr16:56,742,684-56,763,880
(GRCh37/hg19)
Size:
21,197 bases
Orientation:
Minus strand

Genomic View for LOC105371286 Gene

Genes around LOC105371286 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371286 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371286 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371286 Gene

Proteins for LOC105371286 Gene

Post-translational modifications for LOC105371286 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371286 Gene

Domains & Families for LOC105371286 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371286 Gene

Function for LOC105371286 Gene

Phenotypes From GWAS Catalog for LOC105371286 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371286 Gene

Localization for LOC105371286 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371286 Gene

Pathways & Interactions for LOC105371286 Gene

SuperPathways for LOC105371286 Gene

No Data Available

Interacting Proteins for LOC105371286 Gene

Gene Ontology (GO) - Biological Process for LOC105371286 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371286 Gene

Drugs & Compounds for LOC105371286 Gene

No Compound Related Data Available

Transcripts for LOC105371286 Gene

mRNA/cDNA for LOC105371286 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(2) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371286 Gene

No ASD Table

Relevant External Links for LOC105371286 Gene

GeneLoc Exon Structure for
LOC105371286

Expression for LOC105371286 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371286 Gene

Orthologs for LOC105371286 Gene

Evolution for LOC105371286 Gene

ENSEMBL:
Gene Tree for LOC105371286 (if available)
TreeFam:
Gene Tree for LOC105371286 (if available)

No data available for Orthologs for LOC105371286 Gene

Paralogs for LOC105371286 Gene

No data available for Paralogs for LOC105371286 Gene

Variants for LOC105371286 Gene

Sequence variations from dbSNP and Humsavar for LOC105371286 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000119701 -- 56,713,739(-) A/G intron_variant
rs1000173765 -- 56,713,994(-) G/A intron_variant
rs1000749713 -- 56,719,852(-) C/T intron_variant
rs1000900392 -- 56,725,504(-) T/G intron_variant
rs1001520831 -- 56,728,261(-) G/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371286 Gene

Disorders for LOC105371286 Gene

No disorders were found for LOC105371286 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371286 Gene

Publications for LOC105371286 Gene

No publications were found for LOC105371286 Gene.

Products for LOC105371286 Gene

Sources for LOC105371286 Gene

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