Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105371251 Gene

Subcategory (RNA class) for LOC105371251 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371251 Gene

  • Uncharacterized LOC105371251 3

External Ids for LOC105371251 Gene

Previous GeneCards Identifiers for LOC105371251 Gene

  • GC16U901834

Summaries for LOC105371251 Gene

GeneCards Summary for LOC105371251 Gene

LOC105371251 (Uncharacterized LOC105371251) is an RNA Gene, and is affiliated with the ncRNA class. Diseases associated with LOC105371251 include Cylindromatosis, Familial and Trichoepithelioma, Multiple Familial, 2.

Additional gene information for LOC105371251 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371251 Gene

Genomics for LOC105371251 Gene

GeneHancer (GH) Regulatory Elements for LOC105371251 Gene

Promoters and enhancers for LOC105371251 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J050805 Promoter/Enhancer 1.4 Ensembl ENCODE 600.7 -1.2 -1183 1.4 CC2D1A CTCF AHR ZNF24 SP7 MLLT1 MZF1 RAD21 MTA1 KAT8 LOC105371251 LINC02168 BRD7 ENSG00000261644 GC16M050828
GH16J050804 Enhancer 0.8 Ensembl 600.7 +0.7 731 0.4 PPARG SP5 ZNF644 KAT8 RXRA GATAD2A ZNF7 RXRB SP1 RCOR2 LINC02168 LOC105371251 ENSG00000260616 BRD7
GH16J050803 Enhancer 0.7 FANTOM5 Ensembl 0.7 +2.1 2131 0.8 ATF7 CREB1 ATF2 ENSG00000260616 ENSG00000205414 LOC105371251 ENSG00000261644 LOC102724907
GH16J050800 Enhancer 0.3 Ensembl 0.4 +5.1 5131 0.4 EBF1 BRD7 ENSG00000205414 ENSG00000260616 LOC105371251 ENSG00000261644 CYLD LOC102724907
GH16J050785 Enhancer 0.2 Ensembl 0.3 +20.1 20131 0.4 BRD7 NKD1 NOD2 ENSG00000260616 LOC105371251 ENSG00000261644 LOC102724907 CYLD
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371251 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371251 Gene

Genomic Locations for LOC105371251 Gene
chr16:50,783,859-50,805,332
(GRCh38/hg38)
Size:
21,474 bases
Orientation:
Minus strand

Genomic View for LOC105371251 Gene

Genes around LOC105371251 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371251 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371251 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371251 Gene

Proteins for LOC105371251 Gene

Post-translational modifications for LOC105371251 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371251 Gene

Domains & Families for LOC105371251 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371251 Gene

Function for LOC105371251 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371251 Gene

Localization for LOC105371251 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371251 Gene

Pathways & Interactions for LOC105371251 Gene

PathCards logo

SuperPathways for LOC105371251 Gene

No Data Available

Interacting Proteins for LOC105371251 Gene

Gene Ontology (GO) - Biological Process for LOC105371251 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371251 Gene

Drugs & Compounds for LOC105371251 Gene

No Compound Related Data Available

Transcripts for LOC105371251 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371251 Gene

No ASD Table

Relevant External Links for LOC105371251 Gene

GeneLoc Exon Structure for
LOC105371251

No data available for mRNA/cDNA for LOC105371251 Gene

Expression for LOC105371251 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371251 Gene

Orthologs for LOC105371251 Gene

No data available for Orthologs and Evolution for LOC105371251 Gene

Paralogs for LOC105371251 Gene

No data available for Paralogs for LOC105371251 Gene

Variants for LOC105371251 Gene

Sequence variations from dbSNP and Humsavar for LOC105371251 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs111951225 likely-benign, Spiegler-Brooke syndrome, Cylindromatosis, familial, Trichoepithelioma multiple familial 2 50,799,977(-) T/C intron_variant
rs113748745 likely-benign, Spiegler-Brooke syndrome, Cylindromatosis, familial, Trichoepithelioma multiple familial 2 50,801,075(-) C/T intron_variant
rs116979331 likely-benign, Cylindromatosis, familial, Trichoepithelioma multiple familial 2, Spiegler-Brooke syndrome 50,796,555(-) G/A intron_variant
rs117537927 likely-benign, Trichoepithelioma multiple familial 2, Cylindromatosis, familial, Spiegler-Brooke syndrome 50,797,349(-) G/A intron_variant
rs11865799 benign, Cylindromatosis, familial, Spiegler-Brooke syndrome, Trichoepithelioma multiple familial 2 50,791,548(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371251 Gene

Disorders for LOC105371251 Gene

MalaCards: The human disease database

(2) MalaCards diseases for LOC105371251 Gene - From: GeneCards

Disorder Aliases PubMed IDs
cylindromatosis, familial
  • ancell-spiegler cylindromas
trichoepithelioma, multiple familial, 2
  • mft2
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LOC105371251: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371251 Gene

Publications for LOC105371251 Gene

No publications were found for LOC105371251 Gene.

No data available for External Links for LOC105371251 Gene

Products for LOC105371251 Gene

Sources for LOC105371251 Gene

Content
Loading form....