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Aliases for LOC105371222 Gene

Subcategory (RNA class) for LOC105371222 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371222 Gene

  • Uncharacterized LOC105371222 3

External Ids for LOC105371222 Gene

Previous GeneCards Identifiers for LOC105371222 Gene

  • GC01U904310

Summaries for LOC105371222 Gene

GeneCards Summary for LOC105371222 Gene

LOC105371222 (Uncharacterized LOC105371222) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371222 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371222 Gene

Genomics for LOC105371222 Gene

GeneHancer (GH) Regulatory Elements for LOC105371222 Gene

Promoters and enhancers for LOC105371222 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J148736 Promoter/Enhancer 0.9 Ensembl dbSUPER 600.7 -0.1 -106 0.2 TARDBP ELF1 MTA1 LOC105371222 RNU6-1171P
GH01J148733 Promoter/Enhancer 0.7 Ensembl dbSUPER 600.7 +1.7 1694 0.2 LOC105371222 NOTCH2NLB
GH01J148728 Enhancer 0.8 ENCODE dbSUPER 0.4 +6.7 6667 0.2 RELA IKZF2 ZNF692 ZXDB IKZF1 PRDM4 ZFP69B ZNF513 ZNF217 ZNF2 LOC105371222 NOTCH2NLB
GH01J148732 Enhancer 0.4 dbSUPER 0.7 +3.5 3536 2.5 IKZF1 IKZF2 DPF2 LOC105371222 NOTCH2NLB
GH01J148719 Enhancer 0.6 dbSUPER 0.4 +13.0 13035 6.1 PRDM10 ZSCAN4 SCRT2 SCRT1 ZFHX2 WT1 ZNF664 KLF1 EGR2 NOTCH2NLB LOC105371222
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371222 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371222 Gene

Genomic Locations for LOC105371222 Gene
chr1:148,733,395-148,735,995
(GRCh38/hg38)
Size:
2,601 bases
Orientation:
Minus strand

Genomic View for LOC105371222 Gene

Genes around LOC105371222 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371222 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371222 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371222 Gene

Proteins for LOC105371222 Gene

Post-translational modifications for LOC105371222 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371222 Gene

Domains & Families for LOC105371222 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371222 Gene

Function for LOC105371222 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371222 Gene

Localization for LOC105371222 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371222 Gene

Pathways & Interactions for LOC105371222 Gene

PathCards logo

SuperPathways for LOC105371222 Gene

No Data Available

Interacting Proteins for LOC105371222 Gene

Gene Ontology (GO) - Biological Process for LOC105371222 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371222 Gene

Drugs & Compounds for LOC105371222 Gene

No Compound Related Data Available

Transcripts for LOC105371222 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371222 Gene

No ASD Table

Relevant External Links for LOC105371222 Gene

GeneLoc Exon Structure for
LOC105371222

No data available for mRNA/cDNA for LOC105371222 Gene

Expression for LOC105371222 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371222 Gene

Orthologs for LOC105371222 Gene

No data available for Orthologs and Evolution for LOC105371222 Gene

Paralogs for LOC105371222 Gene

No data available for Paralogs for LOC105371222 Gene

Variants for LOC105371222 Gene

Sequence variations from dbSNP and Humsavar for LOC105371222 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs10158443 -- 148,735,960(-) T/C non_coding_transcript_variant
rs111329656 -- 148,732,582(-) T/A non_coding_transcript_variant
rs111545577 -- 148,734,757(-) T/A intron_variant
rs112027674 -- 148,733,994(-) A/T intron_variant
rs112400456 -- 148,734,505(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371222 Gene

Disorders for LOC105371222 Gene

No disorders were found for LOC105371222 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371222 Gene

Publications for LOC105371222 Gene

No publications were found for LOC105371222 Gene.

No data available for External Links for LOC105371222 Gene

Products for LOC105371222 Gene

Sources for LOC105371222 Gene

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