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Aliases for LOC105371211 Gene

Subcategory (RNA class) for LOC105371211 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371211 Gene

  • Uncharacterized LOC105371211 3

External Ids for LOC105371211 Gene

Previous GeneCards Identifiers for LOC105371211 Gene

  • GC01U904825

Summaries for LOC105371211 Gene

GeneCards Summary for LOC105371211 Gene

LOC105371211 (Uncharacterized LOC105371211) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371211 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371211 Gene

Genomics for LOC105371211 Gene

GeneHancer (GH) Regulatory Elements for LOC105371211 Gene

Promoters and enhancers for LOC105371211 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J144484 Enhancer 1 ENCODE 600.7 -0.1 -51 1.1 HDGF CC2D1A MLLT1 GTF2F1 CSDE1 ZSCAN21 CTCF YY1 SP7 PRDM1 LOC105371211 ENSG00000275291
GH01J144495 Enhancer 0.6 Ensembl 0.4 -9.6 -9631 0.8 ZSCAN21 SP7 PRDM1 PRDM10 ZEB2 ZBTB44 ZSCAN5C ATF2 FEZF1 PRDM6 LOC105371211 ENSG00000275291
GH01J144464 Enhancer 0.6 Ensembl 0.4 +16.1 16078 11.4 MTA3 MYC ZNF174 PRDM1 CREB1 ARID3A ZSCAN18 ZNF592 ZFX NBN NBPF15 NBPF20 ENSG00000229002 LOC105371211
GH01J144492 Enhancer 0.4 Ensembl 0.4 -7.3 -7322 0.6 MZF1 ZSCAN5C LOC105371211 ENSG00000275291
GH01J144497 Enhancer 0.4 Ensembl 0.4 -13.1 -13122 2.2 FOXA1 PPP1R10 NBPF20 NBPF15 LOC105371211 ENSG00000275291
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371211 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371211 Gene

Genomic Locations for LOC105371211 Gene
chr1:144,472,375-144,485,779
(GRCh38/hg38)
Size:
13,405 bases
Orientation:
Minus strand

Genomic View for LOC105371211 Gene

Genes around LOC105371211 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371211 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371211 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371211 Gene

Proteins for LOC105371211 Gene

Post-translational modifications for LOC105371211 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371211 Gene

Domains & Families for LOC105371211 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371211 Gene

Function for LOC105371211 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371211 Gene

Localization for LOC105371211 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371211 Gene

Pathways & Interactions for LOC105371211 Gene

PathCards logo

SuperPathways for LOC105371211 Gene

No Data Available

Interacting Proteins for LOC105371211 Gene

Gene Ontology (GO) - Biological Process for LOC105371211 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371211 Gene

Drugs & Compounds for LOC105371211 Gene

No Compound Related Data Available

Transcripts for LOC105371211 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371211 Gene

No ASD Table

Relevant External Links for LOC105371211 Gene

GeneLoc Exon Structure for
LOC105371211

No data available for mRNA/cDNA for LOC105371211 Gene

Expression for LOC105371211 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371211 Gene

Orthologs for LOC105371211 Gene

No data available for Orthologs and Evolution for LOC105371211 Gene

Paralogs for LOC105371211 Gene

No data available for Paralogs for LOC105371211 Gene

Variants for LOC105371211 Gene

Sequence variations from dbSNP and Humsavar for LOC105371211 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs10158015 -- 144,472,680(-) T/A/C genic_downstream_transcript_variant, intron_variant
rs10545745 -- 144,470,755(-) /AAAA/AAAAA/AAAATAAAA genic_downstream_transcript_variant, intron_variant
rs10796924 -- 144,467,463(-) A/C/G genic_downstream_transcript_variant, non_coding_transcript_variant
rs10796925 -- 144,467,188(-) C/T genic_downstream_transcript_variant, non_coding_transcript_variant
rs10908412 -- 144,468,037(-) T/C genic_downstream_transcript_variant, non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371211 Gene

Disorders for LOC105371211 Gene

No disorders were found for LOC105371211 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371211 Gene

Publications for LOC105371211 Gene

No publications were found for LOC105371211 Gene.

No data available for External Links for LOC105371211 Gene

Products for LOC105371211 Gene

Sources for LOC105371211 Gene

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