Aliases for LOC105371200 Gene

Data sources for LOC105371200 Gene:

RNA type for LOC105371200 Gene

lncRNA

Aliases for LOC105371200 Gene

External Ids for LOC105371200 Gene

Previous GeneCards Identifiers for LOC105371200 Gene

  • GC16U901854
  • GC16P035251
  • GC16P035441
  • GC16P035468
  • GC16P035497
  • GC16P035623
  • GC16P035266
  • GC16P035286
  • GC16P035306
  • GC16P035325
  • GC16P035344
  • GC16P035372
  • GC16P035392
  • GC16P035414
  • GC16P035722
  • GC16P035857

Summaries for LOC105371200 Gene

GeneCards Summary for LOC105371200 Gene

LOC105371200 (Uncharacterized LOC105371200) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105371200 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105371200 Gene

Genomics for LOC105371200 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105371200 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J035207 Promoter 0.6 Ensembl 250.7 0.0 -6 0.8 NRF1 RFX1 POLR2A BMI1 SP1 LOC105371200 TP53TG3GP lnc-TP53TG3-55 ENSG00000260073 LOC107987235
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371200 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105371200 Gene

Latest Assembly
chr16:35,207,807-35,284,146
(GRCh38/hg38)
Size:
76,340 bases
Orientation:
Plus strand

Previous Assembly
chr16:34,442,308-34,518,517
(GRCh37/hg19 by Ensembl)
Size:
76,210 bases
Orientation:
Plus strand

Genomic View for LOC105371200 Gene

Genes around LOC105371200 on UCSC Golden Path with GeneCards custom track
LOC105371200 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105371200 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371200 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371200 Gene

Proteins for LOC105371200 Gene

Post-translational modifications for LOC105371200 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371200 Gene

Domains & Families for LOC105371200 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105371200 Gene

Function for LOC105371200 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371200 Gene

Localization for LOC105371200 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371200 Gene

Pathways & Interactions for LOC105371200 Gene

PathCards logo

SuperPathways for LOC105371200 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105371200 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105371200 Gene

Drugs & Compounds for LOC105371200 Gene

No Compound Related Data Available

Transcripts for LOC105371200 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC105371200 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00004B10D6_9606 lncRNA 853 3

Ensembl: ENST00000569557 (view in UCSC) ,

LNCipedia: lnc-TP53TG3F-9:2,

NONCODE: NONHSAT142166.2,

URS00002699D3_9606 lncRNA 476 2

Ensembl: ENST00000562572 (view in UCSC) ,

LNCipedia: lnc-TP53TG3F-9:1,

URS0000EEC275_9606 lncRNA 836 1

Ensembl: ENST00000657477 (view in UCSC) ,

URS00008B395D_9606 lncRNA 3312 3

LncBook: HSALNT0230263,

LNCipedia: lnc-TP53TG3F-9:3,

NONCODE: NONHSAT142170.2,

URS00008B8EDD_9606 lncRNA 488 3

LncBook: HSALNT0230266,

LNCipedia: lnc-TP53TG3F-8:2,

NONCODE: NONHSAT142172.2,

LOC105371200 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371200 Gene

No ASD Table

Relevant External Links for LOC105371200 Gene

GeneLoc Exon Structure for
LOC105371200

No data available for mRNA/cDNA for LOC105371200 Gene

Expression for LOC105371200 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371200 Gene

Orthologs for LOC105371200 Gene

Evolution for LOC105371200 Gene

ENSEMBL:
Gene Tree for LOC105371200 (if available)
TreeFam:
Gene Tree for LOC105371200 (if available)

No data available for Orthologs for LOC105371200 Gene

Paralogs for LOC105371200 Gene

No data available for Paralogs for LOC105371200 Gene

Variants for LOC105371200 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105371200 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371200 Gene

Disorders for LOC105371200 Gene

No disorders were found for LOC105371200 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371200 Gene

Publications for LOC105371200 Gene

No publications were found for LOC105371200 Gene.

No data available for Mastermind for LOC105371200 Gene

Products for LOC105371200 Gene

Sources for LOC105371200 Gene