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Aliases for LOC105371159 Gene

Subcategory (RNA class) for LOC105371159 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371159 Gene

  • Uncharacterized LOC105371159 3

External Ids for LOC105371159 Gene

Previous GeneCards Identifiers for LOC105371159 Gene

  • GC16U902106

Summaries for LOC105371159 Gene

GeneCards Summary for LOC105371159 Gene

LOC105371159 (Uncharacterized LOC105371159) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371159 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371159 Gene

Genomics for LOC105371159 Gene

GeneHancer (GH) Regulatory Elements for LOC105371159 Gene

Promoters and enhancers for LOC105371159 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J029293 Promoter/Enhancer 1.2 FANTOM5 Ensembl dbSUPER 600.7 +1.0 950 1.2 ZNF10 GLIS1 IKZF1 RAD21 LOC105371159 ENSG00000260953 PPP4C ENSG00000260517 SLX1B ENSG00000198106 ENSG00000284685
GH16J029294 Enhancer 0.6 Ensembl dbSUPER 600.7 -1.5 -1549 1.8 ZNF24 EGR2 LOC105371159 ENSG00000260953 PPP4C ENSG00000198106 SNX29P2 ENSG00000284685
GH16J029287 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 0.7 +4.3 4303 4.5 CBFA2T2 ZNF148 ZNF687 NCOA3 MYC TFE3 ZBTB7A SP7 TRIM24 KLF14 ENSG00000198106 ENSG00000260953 CDC37P1 SLX1B INO80E PPP4C LOC105371159 ENSG00000277999 ENSG00000284685
GH16J029299 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.4 -6.1 -6055 1.5 ELF3 CEBPG BACH1 TFE3 KAT8 CEBPA GATAD2A ZNF7 RXRB KMT2B SNX29P2 SPNS1 ENSG00000260953 C16orf54 ENSG00000198106 LOC105371159 ENSG00000284685
GH16J029296 Enhancer 0.5 Ensembl dbSUPER 0.7 -2.8 -2750 0.2 ZNF24 LOC105371159 SNX29P2 ENSG00000198106 ENSG00000284685
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371159 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371159 Gene

Genomic Locations for LOC105371159 Gene
chr16:29,291,886-29,294,351
(GRCh38/hg38)
Size:
2,466 bases
Orientation:
Minus strand

Genomic View for LOC105371159 Gene

Genes around LOC105371159 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371159 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371159 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371159 Gene

Proteins for LOC105371159 Gene

Post-translational modifications for LOC105371159 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371159 Gene

Domains & Families for LOC105371159 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371159 Gene

Function for LOC105371159 Gene

Phenotypes From GWAS Catalog for LOC105371159 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371159 Gene

Localization for LOC105371159 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371159 Gene

Pathways & Interactions for LOC105371159 Gene

PathCards logo

SuperPathways for LOC105371159 Gene

No Data Available

Interacting Proteins for LOC105371159 Gene

Gene Ontology (GO) - Biological Process for LOC105371159 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371159 Gene

Drugs & Compounds for LOC105371159 Gene

No Compound Related Data Available

Transcripts for LOC105371159 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371159 Gene

No ASD Table

Relevant External Links for LOC105371159 Gene

GeneLoc Exon Structure for
LOC105371159

No data available for mRNA/cDNA for LOC105371159 Gene

Expression for LOC105371159 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371159 Gene

Orthologs for LOC105371159 Gene

No data available for Orthologs and Evolution for LOC105371159 Gene

Paralogs for LOC105371159 Gene

No data available for Paralogs for LOC105371159 Gene

Variants for LOC105371159 Gene

Sequence variations from dbSNP and Humsavar for LOC105371159 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000012583 -- 29,272,998(-) C/A genic_downstream_transcript_variant, non_coding_transcript_variant
rs1000181447 -- 29,296,747(-) G/A non_coding_transcript_variant
rs1000288342 -- 29,283,899(-) G/C genic_downstream_transcript_variant, intron_variant
rs1000512134 -- 29,289,054(-) A/T intron_variant
rs1000601813 -- 29,277,686(-) C/T genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371159 Gene

Disorders for LOC105371159 Gene

No disorders were found for LOC105371159 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371159 Gene

Publications for LOC105371159 Gene

No publications were found for LOC105371159 Gene.

No data available for External Links for LOC105371159 Gene

Products for LOC105371159 Gene

Sources for LOC105371159 Gene

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