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Aliases for LOC105371157 Gene

Subcategory (RNA class) for LOC105371157 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371157 Gene

  • Uncharacterized LOC105371157 3

External Ids for LOC105371157 Gene

Previous GeneCards Identifiers for LOC105371157 Gene

  • GC16U902113

Summaries for LOC105371157 Gene

GeneCards Summary for LOC105371157 Gene

LOC105371157 (Uncharacterized LOC105371157) is an RNA Gene, and is affiliated with the ncRNA class. Diseases associated with LOC105371157 include Joubert Syndrome 26.

Additional gene information for LOC105371157 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371157 Gene

Genomics for LOC105371157 Gene

GeneHancer (GH) Regulatory Elements for LOC105371157 Gene

Promoters and enhancers for LOC105371157 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J027748 Enhancer 0.9 ENCODE 600.7 -1.3 -1293 0.9 CC2D1A CBFA2T2 TFE3 SMARCA4 FOSL2 CREB1 DPF2 ATF1 REST PKNOX1 LOC105371157 GC16M027762 KIAA0556
GH16J027746 Enhancer 0.2 ENCODE 600.7 +1.6 1575 0.2 LOC105371157 IL21R-AS1 GC16M027722 ENSG00000201371 KIAA0556
GH16J027755 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -11.3 -11311 9.2 CC2D1A CBFA2T2 MAFK TRIM24 SMARCA4 DPF2 IKZF1 MTA2 NR2C1 GATAD2B IL21R-AS1 IL4R LOC105371157 GC16M027762 KIAA0556
GH16J027729 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +18.1 18089 3.2 MAFK ZIC2 ATF7 ZNF316 SCRT2 ZFHX2 ATF2 POLR2A EGR2 IL21R-AS1 GC16M027722 ENSG00000201371 LOC105371157 KIAA0556
GH16J027769 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.3 -22.3 -22313 2 BCOR JUND IL21R-AS1 GC16M027762 LOC105371157 KIAA0556
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371157 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371157 Gene

Genomic Locations for LOC105371157 Gene
chr16:27,746,108-27,747,890
(GRCh38/hg38)
Size:
1,783 bases
Orientation:
Minus strand

Genomic View for LOC105371157 Gene

Genes around LOC105371157 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371157 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371157 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371157 Gene

Proteins for LOC105371157 Gene

Post-translational modifications for LOC105371157 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371157 Gene

Domains & Families for LOC105371157 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371157 Gene

Function for LOC105371157 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371157 Gene

Localization for LOC105371157 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371157 Gene

Pathways & Interactions for LOC105371157 Gene

PathCards logo

SuperPathways for LOC105371157 Gene

No Data Available

Interacting Proteins for LOC105371157 Gene

Gene Ontology (GO) - Biological Process for LOC105371157 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371157 Gene

Drugs & Compounds for LOC105371157 Gene

No Compound Related Data Available

Transcripts for LOC105371157 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371157 Gene

No ASD Table

Relevant External Links for LOC105371157 Gene

GeneLoc Exon Structure for
LOC105371157

No data available for mRNA/cDNA for LOC105371157 Gene

Expression for LOC105371157 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371157 Gene

Orthologs for LOC105371157 Gene

No data available for Orthologs and Evolution for LOC105371157 Gene

Paralogs for LOC105371157 Gene

No data available for Paralogs for LOC105371157 Gene

Variants for LOC105371157 Gene

Sequence variations from dbSNP and Humsavar for LOC105371157 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs864309712 likely-pathogenic, pathogenic, Joubert syndrome, Joubert syndrome 26 27,749,634(-) C/T upstream_transcript_variant
rs1000275636 -- 27,748,834(-) AAAAAAA/AAAAAAAA upstream_transcript_variant
rs1001569811 -- 27,748,107(-) G/A non_coding_transcript_variant
rs1003014692 -- 27,747,337(-) G/A intron_variant
rs1003563054 -- 27,746,734(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371157 Gene

Disorders for LOC105371157 Gene

MalaCards: The human disease database

(1) MalaCards diseases for LOC105371157 Gene - From: GeneCards

Disorder Aliases PubMed IDs
joubert syndrome 26
  • jbts26
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LOC105371157: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371157 Gene

Publications for LOC105371157 Gene

No publications were found for LOC105371157 Gene.

No data available for External Links for LOC105371157 Gene

Products for LOC105371157 Gene

Sources for LOC105371157 Gene

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