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Aliases for LOC105371125 Gene

Subcategory (RNA class) for LOC105371125 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371125 Gene

  • Uncharacterized LOC105371125 3

External Ids for LOC105371125 Gene

Previous GeneCards Identifiers for LOC105371125 Gene

  • GC16U902023

Summaries for LOC105371125 Gene

GeneCards Summary for LOC105371125 Gene

LOC105371125 (Uncharacterized LOC105371125) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371125 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371125 Gene

Genomics for LOC105371125 Gene

GeneHancer (GH) Regulatory Elements for LOC105371125 Gene

Promoters and enhancers for LOC105371125 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J021285 Enhancer 0.6 Ensembl 600.7 -1.8 -1769 5.8 CC2D1A MAFK ZNF316 USF1 MAFG CHAMP1 HLF NFYC EMSY LOC105371125 CRYM DNAH3 TMEM159 ZP2 GC16M021264 LOC105371123
GH16J021279 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.4 -12.2 -12169 1.4 SP1 ZNF652 CTCF ELF3 AHR ZBTB7A SP7 HNF1A PPARG SP5 CRYM DNAH3 TMEM159 ZP2 ENSG00000260306 LOC105371125 GC16M021264 LOC105371123
GH16J021283 Promoter/Enhancer 1.4 Ensembl ENCODE 0.4 -6.6 -6599 1.5 CTCF KAT8 GLIS2 ZBTB8A ZNF600 ZIC2 GATAD2A NFKBIZ RXRB PATZ1 CRYM TMEM159 DNAH3 LOC105371125 GC16M021264 LOC105371123
GH16J021260 Enhancer 1.2 Ensembl ENCODE 0.3 -29.0 -28950 1.9 CC2D1A ELF3 ZKSCAN8 MNT CBFA2T2 ZNF148 CEBPG RERE AHR BACH1 CRYM ANKS4B DNAH3 TMEM159 ZP2 SMG1P4 LOC105371123 LOC105371125
GH16J021263 Enhancer 1.1 Ensembl ENCODE 0.3 -25.9 -25869 3.2 CC2D1A ELF3 MNT CEBPG SP1 HNF1A SP5 ZNF680 IKZF1 CEBPA CRYM ANKS4B TMEM159 DNAH3 ZP2 LOC105371123 LOC105371125 GC16M021264
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371125 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371125 Gene

Genomic Locations for LOC105371125 Gene
chr16:21,290,470-21,294,346
(GRCh38/hg38)
Size:
3,877 bases
Orientation:
Plus strand

Genomic View for LOC105371125 Gene

Genes around LOC105371125 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371125 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371125 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371125 Gene

Proteins for LOC105371125 Gene

Post-translational modifications for LOC105371125 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371125 Gene

Domains & Families for LOC105371125 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371125 Gene

Function for LOC105371125 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371125 Gene

Localization for LOC105371125 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371125 Gene

Pathways & Interactions for LOC105371125 Gene

PathCards logo

SuperPathways for LOC105371125 Gene

No Data Available

Interacting Proteins for LOC105371125 Gene

Gene Ontology (GO) - Biological Process for LOC105371125 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371125 Gene

Drugs & Compounds for LOC105371125 Gene

No Compound Related Data Available

Transcripts for LOC105371125 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371125 Gene

No ASD Table

Relevant External Links for LOC105371125 Gene

GeneLoc Exon Structure for
LOC105371125

No data available for mRNA/cDNA for LOC105371125 Gene

Expression for LOC105371125 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371125 Gene

Orthologs for LOC105371125 Gene

No data available for Orthologs and Evolution for LOC105371125 Gene

Paralogs for LOC105371125 Gene

No data available for Paralogs for LOC105371125 Gene

Variants for LOC105371125 Gene

Sequence variations from dbSNP and Humsavar for LOC105371125 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000093621 -- 21,293,080(+) ATA/A intron_variant
rs1000162667 -- 21,290,138(+) C/G upstream_transcript_variant
rs1000525843 -- 21,288,713(+) T/C upstream_transcript_variant
rs1001002558 -- 21,293,858(+) A/G non_coding_transcript_variant
rs1001392887 -- 21,293,416(+) C/A/T non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371125 Gene

Disorders for LOC105371125 Gene

No disorders were found for LOC105371125 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371125 Gene

Publications for LOC105371125 Gene

No publications were found for LOC105371125 Gene.

No data available for External Links for LOC105371125 Gene

Products for LOC105371125 Gene

Sources for LOC105371125 Gene

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