Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105371114 Gene

Subcategory (RNA class) for LOC105371114 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371114 Gene

  • Uncharacterized LOC105371114 3
  • CTA-363E6.2 3

External Ids for LOC105371114 Gene

Previous GeneCards Identifiers for LOC105371114 Gene

  • GC16U901855

Summaries for LOC105371114 Gene

GeneCards Summary for LOC105371114 Gene

LOC105371114 (Uncharacterized LOC105371114) is an RNA Gene, and is affiliated with the ncRNA class. Diseases associated with LOC105371114 include Lung Cancer Susceptibility 3.

Additional gene information for LOC105371114 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371114 Gene

Genomics for LOC105371114 Gene

GeneHancer (GH) Regulatory Elements for LOC105371114 Gene

Promoters and enhancers for LOC105371114 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J019392 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 600.7 -1.6 -1625 5.5 MTA3 CC2D1A CBFA2T2 CEBPG NFIB MAFK TRIM24 SP1 PRDM1 SMARCA4 TMC5 LOC105371114 ENSG00000280265 SYT17 RNU4-46P COQ7 ENSG00000259925
GH16J019388 Enhancer 1 Ensembl ENCODE 0.7 +4.1 4096 1.1 ELF3 CTCF CEBPG ZSCAN21 RAD21 ZBTB8A PRDM10 ZIC2 CEBPA REST GC16P019387 RNU4-46P SYT17 LOC105371114 ENSG00000259925
GH16J019381 Enhancer 1 Ensembl ENCODE 0.4 +10.6 10563 2.2 CEBPG SP1 GLIS2 ZBTB8A PRDM10 ZIC2 CEBPA GATAD2A PATZ1 SOX13 TMC5 SYT17 GDE1 GC16P019387 GC16P019371 LOC105371114 ENSG00000259925
GH16J019375 Enhancer 1 Ensembl ENCODE 0.4 +17.8 17762 0.6 CC2D1A CTCF ZNF384 RAD21 KAT8 PKNOX1 ARID2 GATAD2A REST TRIM22 TMC5 GC16P019371 GC16P019387 LOC105371114 ENSG00000259925
GH16J019384 Enhancer 0.7 Ensembl ENCODE 0.4 +8.6 8579 1.1 CTBP1 GATA3 ELF1 FOS JUND TMC5 SYT17 KNOP1 GC16P019387 LOC105371114 GC16P019371 ENSG00000259925
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371114 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371114 Gene

Genomic Locations for LOC105371114 Gene
chr16:19,344,393-19,393,463
(GRCh38/hg38)
Size:
49,071 bases
Orientation:
Minus strand

Genomic View for LOC105371114 Gene

Genes around LOC105371114 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371114 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371114 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371114 Gene

Proteins for LOC105371114 Gene

Post-translational modifications for LOC105371114 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371114 Gene

Domains & Families for LOC105371114 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371114 Gene

Function for LOC105371114 Gene

Phenotypes From GWAS Catalog for LOC105371114 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371114 Gene

Localization for LOC105371114 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371114 Gene

Pathways & Interactions for LOC105371114 Gene

PathCards logo

SuperPathways for LOC105371114 Gene

No Data Available

Interacting Proteins for LOC105371114 Gene

Gene Ontology (GO) - Biological Process for LOC105371114 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371114 Gene

Drugs & Compounds for LOC105371114 Gene

No Compound Related Data Available

Transcripts for LOC105371114 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371114 Gene

No ASD Table

Relevant External Links for LOC105371114 Gene

GeneLoc Exon Structure for
LOC105371114

No data available for mRNA/cDNA for LOC105371114 Gene

Expression for LOC105371114 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371114 Gene

Orthologs for LOC105371114 Gene

No data available for Orthologs and Evolution for LOC105371114 Gene

Paralogs for LOC105371114 Gene

No data available for Paralogs for LOC105371114 Gene

Variants for LOC105371114 Gene

Sequence variations from dbSNP and Humsavar for LOC105371114 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000042222 -- 19,374,319(-) G/T genic_downstream_transcript_variant, intron_variant
rs1000057056 -- 19,394,225(-) G/A non_coding_transcript_variant
rs1000073341 -- 19,350,072(-) C/T genic_downstream_transcript_variant, intron_variant
rs1000080211 -- 19,274,695(-) C/T genic_downstream_transcript_variant, intron_variant
rs1000080717 -- 19,359,414(-) G/A genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371114 Gene

Disorders for LOC105371114 Gene

MalaCards: The human disease database

(1) MalaCards diseases for LOC105371114 Gene - From: LncRNADisease

Disorder Aliases PubMed IDs
lung cancer susceptibility 3
  • lncr3
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LOC105371114: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371114 Gene

Publications for LOC105371114 Gene

No publications were found for LOC105371114 Gene.

No data available for External Links for LOC105371114 Gene

Products for LOC105371114 Gene

Sources for LOC105371114 Gene

Content
Loading form....