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Aliases for LOC105371100 Gene

Subcategory (RNA class) for LOC105371100 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371100 Gene

  • Uncharacterized LOC105371100 3

External Ids for LOC105371100 Gene

Previous GeneCards Identifiers for LOC105371100 Gene

  • GC16U901864

Summaries for LOC105371100 Gene

GeneCards Summary for LOC105371100 Gene

LOC105371100 (Uncharacterized LOC105371100) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371100 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371100 Gene

Genomics for LOC105371100 Gene

GeneHancer (GH) Regulatory Elements for LOC105371100 Gene

Promoters and enhancers for LOC105371100 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J016206 Enhancer 1 Ensembl ENCODE 600.7 +1.1 1095 11.4 ZNF652 CBFA2T2 CEBPG MAFK IKZF1 CEBPA PKNOX1 ATF7 CEBPB RAD51 LOC105371100 ENSG00000227827 FOPNL NOMO3 ABCC1 ENSG00000262332 ABCC6
GH16J016194 Enhancer 1.1 Ensembl ENCODE 0.4 -13.6 -13604 0.4 CC2D1A ELF3 CTCF CEBPG ZNF384 MAFK SP7 EGR1 RAD21 ARID2 GC16P016190 LOC105371100 ABCC6
GH16J016199 Enhancer 0.9 Ensembl ENCODE 0.4 -7.1 -7104 4.2 CTCF NKRF IKZF1 PRDM10 BACH1 IKZF2 ZNF629 TRIM22 ZNF692 DPF2 NOMO3 ABCC6 ENSG00000227827 LOC105371100 GC16P016190
GH16J016197 Enhancer 0.7 Ensembl 0.4 -10.7 -10704 1.8 IKZF1 EGR1 ZNF512 NFRKB FOXK2 HES1 MNT TCF12 FOXA1 YBX1 ENSG00000227827 NOMO3 ABCC1 ABCC6 ENSG00000262171 GC16P016190 LOC105371100
GH16J016191 Enhancer 0.7 Ensembl 0.4 -17.0 -17004 1.2 POLR2A IKZF1 MCM2 PRDM1 ZNF24 ZNF512 NFRKB TCF12 FOXA1 YBX1 GC16P016190 ABCC6 ABCC1 FOPNL ENSG00000262171 LOC105371100
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371100 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371100 Gene

Genomic Locations for LOC105371100 Gene
chr16:16,208,605-16,218,808
(GRCh38/hg38)
Size:
10,204 bases
Orientation:
Plus strand

Genomic View for LOC105371100 Gene

Genes around LOC105371100 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371100 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371100 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371100 Gene

Proteins for LOC105371100 Gene

Post-translational modifications for LOC105371100 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371100 Gene

Domains & Families for LOC105371100 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371100 Gene

Function for LOC105371100 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371100 Gene

Localization for LOC105371100 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371100 Gene

Pathways & Interactions for LOC105371100 Gene

PathCards logo

SuperPathways for LOC105371100 Gene

No Data Available

Interacting Proteins for LOC105371100 Gene

Gene Ontology (GO) - Biological Process for LOC105371100 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371100 Gene

Drugs & Compounds for LOC105371100 Gene

No Compound Related Data Available

Transcripts for LOC105371100 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371100 Gene

No ASD Table

Relevant External Links for LOC105371100 Gene

GeneLoc Exon Structure for
LOC105371100

No data available for mRNA/cDNA for LOC105371100 Gene

Expression for LOC105371100 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371100 Gene

Orthologs for LOC105371100 Gene

No data available for Orthologs and Evolution for LOC105371100 Gene

Paralogs for LOC105371100 Gene

No data available for Paralogs for LOC105371100 Gene

Variants for LOC105371100 Gene

Sequence variations from dbSNP and Humsavar for LOC105371100 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1187315015 pathogenic, Pseudoxanthoma elasticum 16,214,323(+) C/T genic_downstream_transcript_variant, intron_variant
rs1315925055 pathogenic, Pseudoxanthoma elasticum 16,208,841(+) G/A/C intron_variant
rs1343632105 pathogenic, Pseudoxanthoma elasticum 16,208,813(+) AGAG/AGAGAG intron_variant
rs1474063386 pathogenic, Pseudoxanthoma elasticum 16,214,329(+) G/A genic_downstream_transcript_variant, intron_variant
rs1555520136 pathogenic, Pseudoxanthoma elasticum 16,208,756(+) A/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371100 Gene

Disorders for LOC105371100 Gene

No disorders were found for LOC105371100 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371100 Gene

Publications for LOC105371100 Gene

No publications were found for LOC105371100 Gene.

No data available for External Links for LOC105371100 Gene

Products for LOC105371100 Gene

Sources for LOC105371100 Gene

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