LOC105371085 Gene (RNA Gene)

Uncharacterized LOC105371085

GC16M012550
GIFtS:
2
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Aliases for LOC105371085 Gene

Subcategory (RNA class) for LOC105371085 Gene

ncRNA

Aliases for LOC105371085 Gene

  • Uncharacterized LOC105371085 3
  • CTD-3037G24.4 3

External Ids for LOC105371085 Gene

Previous GeneCards Identifiers for LOC105371085 Gene

  • GC16U902199

Summaries for LOC105371085 Gene

GeneCards Summary for LOC105371085 Gene

LOC105371085 (Uncharacterized LOC105371085) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371085 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105371085 Gene

Genomics for LOC105371085 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for LOC105371085 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH16J012566 Enhancer 0.3 Ensembl 600.7 +1.2 1246 2 FOSL2 LOC105371085 SNX29 ENSG00000259876 ENSG00000259899 CPPED1
GH16J012543 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.4 +22.9 22946 7.4 SP1 CREB1 GATAD2A ATF7 TFE3 SOX13 POLR2A BACH1 LARP7 STAT3 ENSG00000260601 ENSG00000259899 SNX29 NPIPB2 CPPED1 LOC105371085 lnc-SHISA9-8
GH16J012570 Enhancer 0.6 ENCODE 0.7 -2.1 -2132 0.1 SP1 CEBPA JUND NR2F2 RAD21 CEBPB HNF4A RXRA MAX REST SNX29 LOC105371085 lnc-CPPED1-1 ENSG00000259899 CPPED1
GH16J012553 Enhancer 0.5 FANTOM5 Ensembl 0.4 +14.7 14704 0.5 ZIC2 SNX29 ENSG00000263307 ENSG00000259876 ENSG00000260601 LOC105371085 CPPED1
GH16J012565 Enhancer 0.2 Ensembl 0.7 +2.6 2646 0.4 SNX29 LOC105371085 ENSG00000259876 ENSG00000259899 CPPED1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371085 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105371085 Gene

Genomic Locations for LOC105371085 Gene
chr16:12,544,746-12,568,247
(GRCh38/hg38)
Size:
23,502 bases
Orientation:
Minus strand

Genomic View for LOC105371085 Gene

Genes around LOC105371085 on UCSC Golden Path with GeneCards custom track
LOC105371085 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105371085 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371085 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC105371085 Gene

Proteins for LOC105371085 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LOC105371085 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371085 Gene

Domains & Families for LOC105371085 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105371085 Gene

Function for LOC105371085 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for LOC105371085 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371085 Gene

Localization for LOC105371085 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371085 Gene

Pathways & Interactions for LOC105371085 Gene

PathCards logo

SuperPathways for LOC105371085 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105371085 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105371085 Gene

Drugs & Compounds for LOC105371085 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LOC105371085 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
LOC105371085 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371085 Gene

No ASD Table

Relevant External Links for LOC105371085 Gene

GeneLoc Exon Structure for
LOC105371085

No data available for mRNA/cDNA for LOC105371085 Gene

Expression for LOC105371085 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371085 Gene

Orthologs for LOC105371085 Gene

No data available for Orthologs and Evolution for LOC105371085 Gene

Paralogs for LOC105371085 Gene

No data available for Paralogs for LOC105371085 Gene

Variants for LOC105371085 Gene

Additional dbSNP identifiers (rs#s) for LOC105371085 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371085 Gene

Disorders for LOC105371085 Gene

No disorders were found for LOC105371085 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371085 Gene

Publications for LOC105371085 Gene

No publications were found for LOC105371085 Gene.

No data available for Mastermind for LOC105371085 Gene

Products for LOC105371085 Gene

Sources for LOC105371085 Gene