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Aliases for LOC105371077 Gene

Subcategory (RNA class) for LOC105371077 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371077 Gene

  • Uncharacterized LOC105371077 3

External Ids for LOC105371077 Gene

Previous GeneCards Identifiers for LOC105371077 Gene

  • GC16U902142

Summaries for LOC105371077 Gene

GeneCards Summary for LOC105371077 Gene

LOC105371077 (Uncharacterized LOC105371077) is an RNA Gene, and is affiliated with the ncRNA class. Diseases associated with LOC105371077 include Epilepsy, Focal, With Speech Disorder And With Or Without Mental Retardation.

Additional gene information for LOC105371077 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371077 Gene

Genomics for LOC105371077 Gene

GeneHancer (GH) Regulatory Elements for LOC105371077 Gene

Promoters and enhancers for LOC105371077 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J009797 Enhancer 0.5 ENCODE 0.4 +5.8 5768 0.2 EED FOSL1 JUN FOS HLF ENSG00000283221 LOC105371077 PIR33121 GRIN2A
GH16J009799 Enhancer 0.5 Ensembl 0.4 +6.0 5950 0.2 FOSL1 JUN FOS HLF ENSG00000283221 LOC105371077 PIR33121 GRIN2A
GH16J009807 Enhancer 0.5 FANTOM5 0.4 +16.3 16284 0.8 CREB1 ATF7 ATF2 GRIN2A ENSG00000283221 LOC105371077 PIR33121
GH16J009800 Enhancer 0.3 Ensembl 0.4 +6.5 6450 0.4 FOS ENSG00000283221 LOC105371077 PIR33121 GRIN2A
GH16J009798 Enhancer 0.3 Ensembl 0.4 +5.4 5350 0.2 EED ENSG00000283221 LOC105371077 PIR33121 GRIN2A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371077 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371077 Gene

Genomic Locations for LOC105371077 Gene
chr16:9,791,751-9,809,101
(GRCh38/hg38)
Size:
17,351 bases
Orientation:
Plus strand

Genomic View for LOC105371077 Gene

Genes around LOC105371077 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371077 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371077 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371077 Gene

Proteins for LOC105371077 Gene

Post-translational modifications for LOC105371077 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371077 Gene

Domains & Families for LOC105371077 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371077 Gene

Function for LOC105371077 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371077 Gene

Localization for LOC105371077 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371077 Gene

Pathways & Interactions for LOC105371077 Gene

PathCards logo

SuperPathways for LOC105371077 Gene

No Data Available

Interacting Proteins for LOC105371077 Gene

Gene Ontology (GO) - Biological Process for LOC105371077 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371077 Gene

Drugs & Compounds for LOC105371077 Gene

No Compound Related Data Available

Transcripts for LOC105371077 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371077 Gene

No ASD Table

Relevant External Links for LOC105371077 Gene

GeneLoc Exon Structure for
LOC105371077

No data available for mRNA/cDNA for LOC105371077 Gene

Expression for LOC105371077 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371077 Gene

Orthologs for LOC105371077 Gene

No data available for Orthologs and Evolution for LOC105371077 Gene

Paralogs for LOC105371077 Gene

No data available for Paralogs for LOC105371077 Gene

Variants for LOC105371077 Gene

Sequence variations from dbSNP and Humsavar for LOC105371077 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1439688451 pathogenic, Rolandic epilepsy 9,798,433(+) C/G/T intron_variant
rs148846694 benign-likely-benign, not specified 9,798,356(+) G/A/C intron_variant
rs1555488119 uncertain-significance, Epilepsy, focal, with speech disorder and with or without mental retardation 9,798,355(+) C/T intron_variant
rs1555488144 pathogenic, Rolandic epilepsy 9,798,454(+) C/T intron_variant
rs367543138 not-provided, likely-benign, not provided, not specified 9,798,431(+) G/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371077 Gene

Disorders for LOC105371077 Gene

MalaCards: The human disease database

(1) MalaCards diseases for LOC105371077 Gene - From: GeneCards

Disorder Aliases PubMed IDs
epilepsy, focal, with speech disorder and with or without mental retardation
  • benign rolandic epilepsy
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LOC105371077: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371077 Gene

Publications for LOC105371077 Gene

No publications were found for LOC105371077 Gene.

No data available for External Links for LOC105371077 Gene

Products for LOC105371077 Gene

Sources for LOC105371077 Gene

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