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Aliases for LOC105371062 Gene

Subcategory (RNA class) for LOC105371062 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105371062 Gene

  • Uncharacterized LOC105371062 3
  • AC009171.2 5

External Ids for LOC105371062 Gene

Previous GeneCards Identifiers for LOC105371062 Gene

  • GC16U902156

Summaries for LOC105371062 Gene

GeneCards Summary for LOC105371062 Gene

LOC105371062 (Uncharacterized LOC105371062) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371062 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371062 Gene

Genomics for LOC105371062 Gene

GeneHancer (GH) Regulatory Elements for LOC105371062 Gene

Promoters and enhancers for LOC105371062 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I004182 Promoter/Enhancer 1.8 Ensembl ENCODE dbSUPER 560.9 -0.3 -273 2.4 HDGF HNRNPUL1 PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 IRF4 YY1 LOC105371062 GC16P004182 ZNF500 CREBBP ZNF75A ANKS3 ZNF597 ZNF263 MTCO1P28 TIGD7
GH16I004157 Enhancer 0.8 ENCODE 5.9 +25.9 25902 1 FOXA2 RAD21 THRB ZSCAN9 RARA MIXL1 SP5 PPARG KLF16 RCOR2 GC16P004158 ADCY9 LOC105371062 DBIP3
GH16I004189 Enhancer 0.5 dbSUPER 8.5 -7.1 -7098 1.8 CC2D1A ESRRA ZNF341 ZIC2 ZBTB5 LOC105371062 GC16P004207 SRL
GH16I004191 Enhancer 0.5 dbSUPER 8.5 -8.5 -8491 0.9 SREBF1 ZNF316 MAFK EMSY LOC105371062 GC16P004207 SRL
GH16I004172 Enhancer 0.4 ENCODE 10.2 +11.3 11260 0.2 FOS BATF GC16P004173 LOC105371062 GC16P004158
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105371062 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371062 Gene

Genomic Locations for LOC105371062 Gene
chr16:4,180,117-4,183,515
(GRCh38/hg38)
Size:
3,399 bases
Orientation:
Minus strand
chr16:4,230,118-4,233,516
(GRCh37/hg19)

Genomic View for LOC105371062 Gene

Genes around LOC105371062 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371062 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371062 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371062 Gene

Proteins for LOC105371062 Gene

Post-translational modifications for LOC105371062 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371062 Gene

Domains & Families for LOC105371062 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371062 Gene

Function for LOC105371062 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371062 Gene

Localization for LOC105371062 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371062 Gene

Pathways & Interactions for LOC105371062 Gene

SuperPathways for LOC105371062 Gene

No Data Available

Interacting Proteins for LOC105371062 Gene

Gene Ontology (GO) - Biological Process for LOC105371062 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371062 Gene

Drugs & Compounds for LOC105371062 Gene

No Compound Related Data Available

Transcripts for LOC105371062 Gene

mRNA/cDNA for LOC105371062 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371062 Gene

No ASD Table

Relevant External Links for LOC105371062 Gene

GeneLoc Exon Structure for
LOC105371062

Expression for LOC105371062 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371062 Gene

Orthologs for LOC105371062 Gene

Evolution for LOC105371062 Gene

ENSEMBL:
Gene Tree for LOC105371062 (if available)
TreeFam:
Gene Tree for LOC105371062 (if available)

No data available for Orthologs for LOC105371062 Gene

Paralogs for LOC105371062 Gene

No data available for Paralogs for LOC105371062 Gene

Variants for LOC105371062 Gene

Sequence variations from dbSNP and Humsavar for LOC105371062 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000053686 -- 4,182,341(-) G/A intron_variant
rs1000210651 -- 4,179,798(-) G/C downstream_transcript_variant
rs1000282183 -- 4,183,971(-) G/A non_coding_transcript_variant
rs1000364263 -- 4,182,384(-) G/A intron_variant
rs1000656376 -- 4,183,414(-) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371062 Gene

Disorders for LOC105371062 Gene

No disorders were found for LOC105371062 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371062 Gene

Publications for LOC105371062 Gene

No publications were found for LOC105371062 Gene.

Products for LOC105371062 Gene

Sources for LOC105371062 Gene

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