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Aliases for LOC105371017 Gene

Subcategory (RNA class) for LOC105371017 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371017 Gene

  • Uncharacterized LOC105371017 3

External Ids for LOC105371017 Gene

Previous GeneCards Identifiers for LOC105371017 Gene

  • GC15U902044

Summaries for LOC105371017 Gene

GeneCards Summary for LOC105371017 Gene

LOC105371017 (Uncharacterized LOC105371017) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371017 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371017 Gene

Genomics for LOC105371017 Gene

GeneHancer (GH) Regulatory Elements for LOC105371017 Gene

Promoters and enhancers for LOC105371017 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J099402 Promoter/Enhancer 1.1 Ensembl ENCODE 600.7 +0.4 405 12.4 SP1 ZIC2 RAD51 ZFHX2 RAD21 HNF4A FOS GLIS1 ZNF146 HNF4G LOC105371017 TTC23 LINC02244 ENSG00000259760
GH15J099407 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +14.9 14904 10.2 ELF3 CTCF ELF1 RAD21 CREB1 GATAD2A TRIM22 CTBP1 ZNF341 IRF2 ENSG00000259341 ENSG00000274294 LINC02244 LOC105371017
GH15J099390 Enhancer 0.4 Ensembl 0.4 -6.4 -6395 0.8 CTCF RAD21 GC15P099387 LOC105371017 LRRC28
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371017 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371017 Gene

Genomic Locations for LOC105371017 Gene
chr15:99,397,396-99,417,208
(GRCh38/hg38)
Size:
19,813 bases
Orientation:
Plus strand

Genomic View for LOC105371017 Gene

Genes around LOC105371017 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371017 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371017 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371017 Gene

Proteins for LOC105371017 Gene

Post-translational modifications for LOC105371017 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371017 Gene

Domains & Families for LOC105371017 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371017 Gene

Function for LOC105371017 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371017 Gene

Localization for LOC105371017 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371017 Gene

Pathways & Interactions for LOC105371017 Gene

PathCards logo

SuperPathways for LOC105371017 Gene

No Data Available

Interacting Proteins for LOC105371017 Gene

Gene Ontology (GO) - Biological Process for LOC105371017 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371017 Gene

Drugs & Compounds for LOC105371017 Gene

No Compound Related Data Available

Transcripts for LOC105371017 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371017 Gene

No ASD Table

Relevant External Links for LOC105371017 Gene

GeneLoc Exon Structure for
LOC105371017

No data available for mRNA/cDNA for LOC105371017 Gene

Expression for LOC105371017 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371017 Gene

Orthologs for LOC105371017 Gene

No data available for Orthologs and Evolution for LOC105371017 Gene

Paralogs for LOC105371017 Gene

No data available for Paralogs for LOC105371017 Gene

Variants for LOC105371017 Gene

Sequence variations from dbSNP and Humsavar for LOC105371017 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000045558 -- 99,411,099(+) C/T intron_variant
rs1000230015 -- 99,413,737(+) C/T intron_variant
rs1000283768 -- 99,408,710(+) C/T intron_variant
rs1000336970 -- 99,408,969(+) T/C intron_variant
rs1000477143 -- 99,403,768(+) C/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371017 Gene

Disorders for LOC105371017 Gene

No disorders were found for LOC105371017 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371017 Gene

Publications for LOC105371017 Gene

No publications were found for LOC105371017 Gene.

No data available for External Links for LOC105371017 Gene

Products for LOC105371017 Gene

Sources for LOC105371017 Gene

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