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Aliases for LOC105371013 Gene

Subcategory (RNA class) for LOC105371013 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371013 Gene

  • Uncharacterized LOC105371013 3

External Ids for LOC105371013 Gene

Previous GeneCards Identifiers for LOC105371013 Gene

  • GC15U901982

Summaries for LOC105371013 Gene

GeneCards Summary for LOC105371013 Gene

LOC105371013 (Uncharacterized LOC105371013) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371013 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371013 Gene

Genomics for LOC105371013 Gene

GeneHancer (GH) Regulatory Elements for LOC105371013 Gene

Promoters and enhancers for LOC105371013 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J099004 Promoter/Enhancer 1.2 EPDnew Ensembl ENCODE 600.7 -0.1 -108 1.4 PGPEP1L LOC105371013 PIR60140 ENSG00000259475
GH15J099009 Enhancer 0.7 Ensembl ENCODE 0.7 +4.1 4083 0.4 SP7 ZEB2 CEBPB ZBTB17 TCF7L2 PRDM6 KLF1 PGPEP1L LOC105371013 PIR40962 ENSG00000259475
GH15J098981 Enhancer 1.4 FANTOM5 Ensembl ENCODE 0.3 -22.7 -22653 3.1 SP1 ZNF121 ZNF687 BACH1 MAFK TRIM24 SP7 CREM MLLT1 SMARCA4 PGPEP1L ENSG00000259475 PIR60140 LOC105371013
GH15J099008 Enhancer 0.3 Ensembl 0.7 +3.0 3003 1 PKNOX1 PGPEP1L PIR40962 LOC105371013 ENSG00000259475
GH15J098979 Enhancer 0.6 Ensembl 0.3 -25.3 -25297 1.6 ZNF687 MLLT1 IKZF1 ZBTB33 IKZF2 PKNOX1 DPF2 RUNX3 NR2F1 NBN ENSG00000259475 PIR60140 PGPEP1L LOC105371013
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371013 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371013 Gene

Genomic Locations for LOC105371013 Gene
chr15:99,005,698-99,010,169
(GRCh38/hg38)
Size:
4,472 bases
Orientation:
Plus strand

Genomic View for LOC105371013 Gene

Genes around LOC105371013 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371013 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371013 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371013 Gene

Proteins for LOC105371013 Gene

Post-translational modifications for LOC105371013 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371013 Gene

Domains & Families for LOC105371013 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371013 Gene

Function for LOC105371013 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371013 Gene

Localization for LOC105371013 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371013 Gene

Pathways & Interactions for LOC105371013 Gene

PathCards logo

SuperPathways for LOC105371013 Gene

No Data Available

Interacting Proteins for LOC105371013 Gene

Gene Ontology (GO) - Biological Process for LOC105371013 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371013 Gene

Drugs & Compounds for LOC105371013 Gene

No Compound Related Data Available

Transcripts for LOC105371013 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371013 Gene

No ASD Table

Relevant External Links for LOC105371013 Gene

GeneLoc Exon Structure for
LOC105371013

No data available for mRNA/cDNA for LOC105371013 Gene

Expression for LOC105371013 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371013 Gene

Orthologs for LOC105371013 Gene

No data available for Orthologs and Evolution for LOC105371013 Gene

Paralogs for LOC105371013 Gene

No data available for Paralogs for LOC105371013 Gene

Variants for LOC105371013 Gene

Sequence variations from dbSNP and Humsavar for LOC105371013 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs111382896 -- 99,005,014(+) G/A upstream_transcript_variant
rs111772803 -- 99,007,135(+) G/A/T intron_variant
rs112008402 -- 99,009,851(+) C/A non_coding_transcript_variant
rs112270263 -- 99,010,607(+) C/G/T downstream_transcript_variant
rs11247386 -- 99,009,933(+) C/A non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371013 Gene

Disorders for LOC105371013 Gene

No disorders were found for LOC105371013 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371013 Gene

Publications for LOC105371013 Gene

No publications were found for LOC105371013 Gene.

No data available for External Links for LOC105371013 Gene

Products for LOC105371013 Gene

Sources for LOC105371013 Gene

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