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Aliases for LOC105370979 Gene

Subcategory (RNA class) for LOC105370979 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370979 Gene

  • Uncharacterized LOC105370979 3

External Ids for LOC105370979 Gene

Previous GeneCards Identifiers for LOC105370979 Gene

  • GC15U901951
  • GC15P093637
  • GC15P096288
  • GC15P093639
  • GC15P094462
  • GC15P094990
  • GC15P095238
  • GC15P095475
  • GC15P095712
  • GC15P095946
  • GC15P096169

Summaries for LOC105370979 Gene

GeneCards Summary for LOC105370979 Gene

LOC105370979 (Uncharacterized LOC105370979) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370979 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370979 Gene

Genomics for LOC105370979 Gene

GeneHancer (GH) Regulatory Elements for LOC105370979 Gene

Promoters and enhancers for LOC105370979 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J093036 Enhancer 1 FANTOM5 ENCODE dbSUPER 0.7 -3.7 -3706 1.7 ZNF600 ZNF316 CTCF MGA POLR2A NFIC MNT BHLHE40 MYC MAX LOC105370979 RGMA MIR3175
GH15J093025 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -13.1 -13107 6.2 CTCF MAFK SP1 RAD21 GLIS2 RXRA ZNF600 ZIC2 ZNF143 REST CHD2 RGMA LOC105370979 MIR3175
GH15J093042 Enhancer 0.7 Ensembl dbSUPER 0.7 +2.5 2494 1 ZNF600 STAT5A KLF17 NRF1 NFATC1 PIR32225 LOC105370979 RGMA
GH15J093035 Enhancer 0.7 ENCODE 0.4 -5.3 -5301 0.2 CTCF MNT MYC CREB1 ATF1 ZNF143 TRIM22 PATZ1 NKRF MGA LOC105370979 RGMA MIR3175
GH15J092898 Promoter/Enhancer 2.6 VISTA EPDnew Ensembl ENCODE dbSUPER 0.1 -132.2 -132238 20.4 ZNF652 SP1 CC2D1A ZFX ELF3 CTCF ZKSCAN8 MNT ZNF148 NKRF CHD2 ASB9P1 FAM174B HMGN1P38 MIR3175 GC15P096557 LINC01578 ENSG00000279765 LOC105370979
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370979 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370979 Gene

Genomic Locations for LOC105370979 Gene
chr15:93,041,407-93,043,253
(GRCh38/hg38)
Size:
1,847 bases
Orientation:
Plus strand
chr15:93,969,559-93,969,587
(GRCh37/hg19)
Size:
29 bases
Orientation:
Plus strand

Genomic View for LOC105370979 Gene

Genes around LOC105370979 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370979 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370979 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370979 Gene

Proteins for LOC105370979 Gene

Post-translational modifications for LOC105370979 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370979 Gene

Domains & Families for LOC105370979 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370979 Gene

Function for LOC105370979 Gene

Phenotypes From GWAS Catalog for LOC105370979 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370979 Gene

Localization for LOC105370979 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370979 Gene

Pathways & Interactions for LOC105370979 Gene

PathCards logo

SuperPathways for LOC105370979 Gene

No Data Available

Interacting Proteins for LOC105370979 Gene

Gene Ontology (GO) - Biological Process for LOC105370979 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370979 Gene

Drugs & Compounds for LOC105370979 Gene

No Compound Related Data Available

Transcripts for LOC105370979 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370979 Gene

No ASD Table

Relevant External Links for LOC105370979 Gene

GeneLoc Exon Structure for
LOC105370979

No data available for mRNA/cDNA for LOC105370979 Gene

Expression for LOC105370979 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370979 Gene

Orthologs for LOC105370979 Gene

No data available for Orthologs and Evolution for LOC105370979 Gene

Paralogs for LOC105370979 Gene

No data available for Paralogs for LOC105370979 Gene

Variants for LOC105370979 Gene

Sequence variations from dbSNP and Humsavar for LOC105370979 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000019197 -- 93,042,902(+) T/C non_coding_transcript_variant
rs1000034720 -- 93,038,220(+) G/A upstream_transcript_variant
rs1000412532 -- 93,039,683(+) A/G/T non_coding_transcript_variant
rs1000597333 -- 93,041,058(+) G/A non_coding_transcript_variant
rs1000747161 -- 93,040,688(+) T/C non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370979 Gene

Disorders for LOC105370979 Gene

No disorders were found for LOC105370979 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370979 Gene

Publications for LOC105370979 Gene

No publications were found for LOC105370979 Gene.

No data available for External Links for LOC105370979 Gene

Products for LOC105370979 Gene

Sources for LOC105370979 Gene

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