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Aliases for LOC105370965 Gene

Subcategory (RNA class) for LOC105370965 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370965 Gene

  • Uncharacterized LOC105370965 3

External Ids for LOC105370965 Gene

Previous GeneCards Identifiers for LOC105370965 Gene

  • GC15U902026

Summaries for LOC105370965 Gene

GeneCards Summary for LOC105370965 Gene

LOC105370965 (Uncharacterized LOC105370965) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370965 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370965 Gene

Genomics for LOC105370965 Gene

GeneHancer (GH) Regulatory Elements for LOC105370965 Gene

Promoters and enhancers for LOC105370965 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J089820 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 600.7 +0.1 132 2.7 MCM2 SMARCA4 DPF2 IKZF1 LEF1 HDAC1 ZNF316 CEBPB SOX6 SP1 LOC105370965 ANPEP AP3S2 FANCI MESP1 ZNF710 CIB1 POLG SEMA4B MIR5094
GH15J089846 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +28.6 28638 6.5 MLLT1 MAFK JUND IKZF1 BACH1 IKZF2 ZNF316 DPF2 NFE2 FOS MIR5094 AP3S2 MESP1 MESP2 ANPEP PLIN1 WDR93 ZNF710 CIB1 LOC105370965
GH15J089827 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.4 +7.0 7015 1.7 NCOA3 SP1 RXRA FOXA2 JUND ESRRA USF1 YY1 ZBTB33 GABPA AP3S2 ANPEP MESP1 ZNF710 CIB1 LOC105370965 MIR5094
GH15J089834 Promoter/Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +15.4 15424 4 NCOA3 POLR2A CTBP1 RFX1 FOS ZNF217 DPF2 GATA3 FOXA1 JUND AP3S2 ANPEP MESP2 MESP1 MIR5094 LOC105370965 ARPIN-AP3S2
GH15J089825 Enhancer 0.7 ENCODE dbSUPER 0.7 +4.0 4035 0.2 CTCF POLR2A MYC MAX MESP1 LOC105370965 MIR5094
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370965 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370965 Gene

Genomic Locations for LOC105370965 Gene
chr15:89,821,449-89,825,989
(GRCh38/hg38)
Size:
4,541 bases
Orientation:
Plus strand

Genomic View for LOC105370965 Gene

Genes around LOC105370965 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370965 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370965 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370965 Gene

Proteins for LOC105370965 Gene

Post-translational modifications for LOC105370965 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370965 Gene

Domains & Families for LOC105370965 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370965 Gene

Function for LOC105370965 Gene

Phenotypes From GWAS Catalog for LOC105370965 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370965 Gene

Localization for LOC105370965 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370965 Gene

Pathways & Interactions for LOC105370965 Gene

PathCards logo

SuperPathways for LOC105370965 Gene

No Data Available

Interacting Proteins for LOC105370965 Gene

Gene Ontology (GO) - Biological Process for LOC105370965 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370965 Gene

Drugs & Compounds for LOC105370965 Gene

No Compound Related Data Available

Transcripts for LOC105370965 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370965 Gene

No ASD Table

Relevant External Links for LOC105370965 Gene

GeneLoc Exon Structure for
LOC105370965

No data available for mRNA/cDNA for LOC105370965 Gene

Expression for LOC105370965 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370965 Gene

Orthologs for LOC105370965 Gene

No data available for Orthologs and Evolution for LOC105370965 Gene

Paralogs for LOC105370965 Gene

No data available for Paralogs for LOC105370965 Gene

Variants for LOC105370965 Gene

Sequence variations from dbSNP and Humsavar for LOC105370965 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000066053 -- 89,826,501(+) G/C intron_variant
rs1000373951 -- 89,828,331(+) T/A intron_variant
rs1000566577 -- 89,824,862(+) T/A intron_variant
rs1000786391 -- 89,826,771(+) C/T intron_variant
rs1000940354 -- 89,820,524(+) C/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370965 Gene

Disorders for LOC105370965 Gene

No disorders were found for LOC105370965 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370965 Gene

Publications for LOC105370965 Gene

No publications were found for LOC105370965 Gene.

No data available for External Links for LOC105370965 Gene

Products for LOC105370965 Gene

Sources for LOC105370965 Gene

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