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Aliases for LOC105370943 Gene

Subcategory (RNA class) for LOC105370943 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370943 Gene

  • Uncharacterized LOC105370943 3

External Ids for LOC105370943 Gene

Previous GeneCards Identifiers for LOC105370943 Gene

  • GC15U902195

Summaries for LOC105370943 Gene

GeneCards Summary for LOC105370943 Gene

LOC105370943 (Uncharacterized LOC105370943) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370943 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370943 Gene

Genomics for LOC105370943 Gene

GeneHancer (GH) Regulatory Elements for LOC105370943 Gene

Promoters and enhancers for LOC105370943 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J040905 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE dbSUPER 600.7 +2.0 1998 3.7 ZNF652 SP1 ELF3 CTCF ZNF148 ZNF121 SP5 KLF14 MLLT1 EGR1 LOC105370943 ENSG00000251161 CHAC1 RHOV EXD1 CHP1 DLL4 GC15M040883
GH15J040902 Enhancer 1.1 ENCODE dbSUPER 600.7 -1.3 -1346 2.4 HDGF CTCF CEBPG AHR SP1 RAD21 GLIS2 PKNOX1 ZBTB33 CEBPA LOC105370943 VPS18 GC15M040883
GH15J040894 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.4 -10.1 -10134 2.8 SP1 CC2D1A ZFX CTCF ELF3 MNT CBFA2T2 NKRF ZNF687 MYC VPS18 LOC105370943 GC15M040883
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370943 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370943 Gene

Genomic Locations for LOC105370943 Gene
chr15:40,904,922-40,908,532
(GRCh38/hg38)
Size:
3,611 bases
Orientation:
Plus strand

Genomic View for LOC105370943 Gene

Genes around LOC105370943 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370943 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370943 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370943 Gene

Proteins for LOC105370943 Gene

Post-translational modifications for LOC105370943 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370943 Gene

Domains & Families for LOC105370943 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370943 Gene

Function for LOC105370943 Gene

Phenotypes From GWAS Catalog for LOC105370943 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370943 Gene

Localization for LOC105370943 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370943 Gene

Pathways & Interactions for LOC105370943 Gene

PathCards logo

SuperPathways for LOC105370943 Gene

No Data Available

Interacting Proteins for LOC105370943 Gene

Gene Ontology (GO) - Biological Process for LOC105370943 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370943 Gene

Drugs & Compounds for LOC105370943 Gene

No Compound Related Data Available

Transcripts for LOC105370943 Gene

mRNA/cDNA for LOC105370943 Gene

(3) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370943 Gene

No ASD Table

Relevant External Links for LOC105370943 Gene

GeneLoc Exon Structure for
LOC105370943

Expression for LOC105370943 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370943 Gene

Orthologs for LOC105370943 Gene

No data available for Orthologs and Evolution for LOC105370943 Gene

Paralogs for LOC105370943 Gene

No data available for Paralogs for LOC105370943 Gene

Variants for LOC105370943 Gene

Sequence variations from dbSNP and Humsavar for LOC105370943 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000076224 -- 40,905,534(+) C/A upstream_transcript_variant
rs1000191963 -- 40,909,325(+) C/T non_coding_transcript_variant
rs1000222963 -- 40,909,665(+) G/A downstream_transcript_variant
rs1000851275 -- 40,906,483(+) G/A upstream_transcript_variant
rs1000902128 -- 40,906,723(+) G/A upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370943 Gene

Disorders for LOC105370943 Gene

No disorders were found for LOC105370943 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370943 Gene

Publications for LOC105370943 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

No data available for External Links for LOC105370943 Gene

Products for LOC105370943 Gene

Sources for LOC105370943 Gene

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