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Aliases for LOC105370940 Gene

Aliases for LOC105370940 Gene

  • Uncharacterized LOC105370940 3
  • Uncharacterized Protein LOC105370940 3

External Ids for LOC105370940 Gene

Previous GeneCards Identifiers for LOC105370940 Gene

  • GC15U901888

Summaries for LOC105370940 Gene

GeneCards Summary for LOC105370940 Gene

LOC105370940 (Uncharacterized LOC105370940) is a Protein Coding gene.

Additional gene information for LOC105370940 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370940 Gene

Genomics for LOC105370940 Gene

GeneHancer (GH) Regulatory Elements for LOC105370940 Gene

Promoters and enhancers for LOC105370940 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J032029 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE 600.7 +0.2 228 2.1 GLIS2 ZBTB8A ZNF600 PRDM10 ZIC2 ZNF740 POLR2A PATZ1 CTCF ZNF692 CHRNA7 LOC105370940 ENSG00000206849
GH15J032028 Enhancer 0.5 ENCODE 600.7 +1.5 1503 0.2 PRDM1 PRDM10 ZNF341 ZBTB17 ZNF335 SIN3A LOC105370940 CHRNA7 ENSG00000206849
GH15J032040 Enhancer 0.6 Ensembl ENCODE 0.4 -11.6 -11576 2.4 NFIB CTCF NFIC CHRNA7 LOC105370940 PIR39753
GH15J031978 Promoter 0.9 Ensembl 0.2 +52.4 52395 0.4 CTCF RAD21 REST ZBTB48 SMC3 ZNF335 ZNF654 ZNF143 XRCC5 ENSG00000206849 LOC105370940 CHRNA7
GH15J032053 Enhancer 0.5 Ensembl 0.3 -23.5 -23505 0.6 POLR2A OSR2 ZFHX2 GLIS1 EGR2 CHRNA7 LOC105370940 PIR39753
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370940 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370940 Gene

Genomic Locations for LOC105370940 Gene
chr15:32,028,535-32,030,596
(GRCh38/hg38)
Size:
2,062 bases
Orientation:
Minus strand

Genomic View for LOC105370940 Gene

Genes around LOC105370940 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370940 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370940 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370940 Gene

Proteins for LOC105370940 Gene

Post-translational modifications for LOC105370940 Gene

No Post-translational modifications

Other Protein References for LOC105370940 Gene

No data available for DME Specific Peptides for LOC105370940 Gene

Domains & Families for LOC105370940 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370940 Gene

Function for LOC105370940 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370940 Gene

Localization for LOC105370940 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370940 Gene

Pathways & Interactions for LOC105370940 Gene

PathCards logo

SuperPathways for LOC105370940 Gene

No Data Available

Interacting Proteins for LOC105370940 Gene

Gene Ontology (GO) - Biological Process for LOC105370940 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370940 Gene

Drugs & Compounds for LOC105370940 Gene

No Compound Related Data Available

Transcripts for LOC105370940 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370940 Gene

No ASD Table

Relevant External Links for LOC105370940 Gene

GeneLoc Exon Structure for
LOC105370940

No data available for mRNA/cDNA for LOC105370940 Gene

Expression for LOC105370940 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370940 Gene

Orthologs for LOC105370940 Gene

No data available for Orthologs and Evolution for LOC105370940 Gene

Paralogs for LOC105370940 Gene

No data available for Paralogs for LOC105370940 Gene

Variants for LOC105370940 Gene

Sequence variations from dbSNP and Humsavar for LOC105370940 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs749361514 uncertain-significance, not specified 32,030,931(-) A/G upstream_transcript_variant
rs1000734150 -- 32,030,268(-) G/A/T coding_sequence_variant, missense_variant, stop_gained
rs1000972639 -- 32,032,001(-) T/A upstream_transcript_variant
rs1001467631 -- 32,032,372(-) G/A upstream_transcript_variant
rs1001897965 -- 32,031,343(-) C/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370940 Gene

Disorders for LOC105370940 Gene

No disorders were found for LOC105370940 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370940 Gene

Publications for LOC105370940 Gene

No publications were found for LOC105370940 Gene.

No data available for External Links for LOC105370940 Gene

Products for LOC105370940 Gene

Sources for LOC105370940 Gene

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