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Aliases for LOC105370917 Gene

Subcategory (RNA class) for LOC105370917 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370917 Gene

  • Uncharacterized LOC105370917 3

External Ids for LOC105370917 Gene

Previous GeneCards Identifiers for LOC105370917 Gene

  • GC15U902015

Summaries for LOC105370917 Gene

GeneCards Summary for LOC105370917 Gene

LOC105370917 (Uncharacterized LOC105370917) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370917 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370917 Gene

Genomics for LOC105370917 Gene

GeneHancer (GH) Regulatory Elements for LOC105370917 Gene

Promoters and enhancers for LOC105370917 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J078997 Enhancer 0.3 Ensembl 600.7 -0.6 -572 0.8 SOX13 LOC105370917 RASGRF1 GC15M078980
GH15J078999 Enhancer 0.2 Ensembl 600.7 +1.2 1228 0.8 LOC105370917 ENSG00000177699 CTSH GC15P079059 RASGRF1
GH15J078987 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -7.5 -7461 12.2 ZNF652 ELF3 MNT POLR2A CEBPG RERE ZNF687 AHR CDC5L ZNF24 RASGRF1 CHRNA5 CTSH LOC105370917 GC15M078980 ENSG00000177699
GH15J079002 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 0.4 +5.2 5244 3.3 SP1 ELF3 ZNF687 JUND ELF1 RELA CREM MLLT1 EGR1 SMARCA4 ENSG00000177699 CTSH LOC105370917 GC15P079059 RASGRF1
GH15J079024 Enhancer 1.1 FANTOM5 Ensembl 0.3 +24.7 24728 5.4 ELF3 MLLT1 CEBPG CDC5L IKZF1 TFE3 PPARG ZNF384 HDGF GMEB1 ENSG00000259562 WDR61 RASGRF1 ENSG00000177699 CTSH HYKK MIR184 ENSG00000259322 LOC105370917 GC15P079059
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370917 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370917 Gene

Genomic Locations for LOC105370917 Gene
chr15:78,998,773-79,011,931
(GRCh38/hg38)
Size:
13,159 bases
Orientation:
Plus strand

Genomic View for LOC105370917 Gene

Genes around LOC105370917 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370917 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370917 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370917 Gene

Proteins for LOC105370917 Gene

Post-translational modifications for LOC105370917 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370917 Gene

Domains & Families for LOC105370917 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370917 Gene

Function for LOC105370917 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370917 Gene

Localization for LOC105370917 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370917 Gene

Pathways & Interactions for LOC105370917 Gene

PathCards logo

SuperPathways for LOC105370917 Gene

No Data Available

Interacting Proteins for LOC105370917 Gene

Gene Ontology (GO) - Biological Process for LOC105370917 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370917 Gene

Drugs & Compounds for LOC105370917 Gene

No Compound Related Data Available

Transcripts for LOC105370917 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370917 Gene

No ASD Table

Relevant External Links for LOC105370917 Gene

GeneLoc Exon Structure for
LOC105370917

No data available for mRNA/cDNA for LOC105370917 Gene

Expression for LOC105370917 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370917 Gene

Orthologs for LOC105370917 Gene

No data available for Orthologs and Evolution for LOC105370917 Gene

Paralogs for LOC105370917 Gene

No data available for Paralogs for LOC105370917 Gene

Variants for LOC105370917 Gene

Sequence variations from dbSNP and Humsavar for LOC105370917 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000569552 -- 79,005,401(+) C/T intron_variant
rs1000786767 -- 79,008,485(+) G/C intron_variant
rs1000849178 -- 79,007,012(+) AAAAAAAAA/AAAAAAAA/AAAAAAAAAA intron_variant
rs1000885526 -- 79,002,930(+) G/A intron_variant
rs1001131160 -- 78,997,755(+) G/A upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370917 Gene

Disorders for LOC105370917 Gene

No disorders were found for LOC105370917 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370917 Gene

Publications for LOC105370917 Gene

No publications were found for LOC105370917 Gene.

No data available for External Links for LOC105370917 Gene

Products for LOC105370917 Gene

Sources for LOC105370917 Gene

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