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Aliases for LOC105370906 Gene

Subcategory (RNA class) for LOC105370906 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370906 Gene

  • Uncharacterized LOC105370906 3

External Ids for LOC105370906 Gene

Previous GeneCards Identifiers for LOC105370906 Gene

  • GC15U902170

Summaries for LOC105370906 Gene

GeneCards Summary for LOC105370906 Gene

LOC105370906 (Uncharacterized LOC105370906) is an RNA Gene, and is affiliated with the ncRNA class. Diseases associated with LOC105370906 include Mental Retardation, Autosomal Recessive 64.

Additional gene information for LOC105370906 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370906 Gene

Genomics for LOC105370906 Gene

GeneHancer (GH) Regulatory Elements for LOC105370906 Gene

Promoters and enhancers for LOC105370906 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J077568 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 600.7 +0.2 220 2.1 ELF3 CEBPG PPARG SP5 RXRA IKZF1 ZIC2 CEBPA RXRB SP1 PIR57145 LOC105370906 ENSG00000259420 ENSG00000259362
GH15J077562 Enhancer 0.7 Ensembl dbSUPER 0.7 -3.1 -3057 1.6 PRDM1 ZNF24 ZNF341 ZBTB33 ENSG00000259362 PEAK1 LOC105370906 LOC101929457
GH15J077545 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 -22.7 -22657 1.6 CBFA2T2 ZNF121 HDAC1 ZNF24 CTBP1 HDAC2 ESRRA ZBTB17 NR2C2 FOSL1 ENSG00000259362 PEAK1 LOC101929457 LOC105370906
GH15J077540 Enhancer 1.2 ENCODE dbSUPER 0.3 -26.5 -26463 3.4 CC2D1A ELF3 CTCF AHR MYC ZBTB7A SP7 POLR2A MLLT1 ZNF644 ENSG00000259362 IREB2 PSMA4 LINGO1 PEAK1 TSPAN3 HMG20A LOC101929457 LOC105370906
GH15J077526 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 -40.8 -40779 6.2 HDGF AHR YY1 SP7 KLF14 SP5 PRDM1 ZNF644 KAT8 GLIS2 ENSG00000259362 TSPAN3 PEAK1 LOC101929457 LOC105370906
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370906 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370906 Gene

Genomic Locations for LOC105370906 Gene
chr15:77,568,858-77,573,031
(GRCh38/hg38)
Size:
4,174 bases
Orientation:
Plus strand

Genomic View for LOC105370906 Gene

Genes around LOC105370906 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370906 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370906 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370906 Gene

Proteins for LOC105370906 Gene

Post-translational modifications for LOC105370906 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370906 Gene

Domains & Families for LOC105370906 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370906 Gene

Function for LOC105370906 Gene

Phenotypes From GWAS Catalog for LOC105370906 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370906 Gene

Localization for LOC105370906 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370906 Gene

Pathways & Interactions for LOC105370906 Gene

PathCards logo

SuperPathways for LOC105370906 Gene

No Data Available

Interacting Proteins for LOC105370906 Gene

Gene Ontology (GO) - Biological Process for LOC105370906 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370906 Gene

Drugs & Compounds for LOC105370906 Gene

No Compound Related Data Available

Transcripts for LOC105370906 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370906 Gene

No ASD Table

Relevant External Links for LOC105370906 Gene

GeneLoc Exon Structure for
LOC105370906

No data available for mRNA/cDNA for LOC105370906 Gene

Expression for LOC105370906 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370906 Gene

Orthologs for LOC105370906 Gene

No data available for Orthologs and Evolution for LOC105370906 Gene

Paralogs for LOC105370906 Gene

No data available for Paralogs for LOC105370906 Gene

Variants for LOC105370906 Gene

Sequence variations from dbSNP and Humsavar for LOC105370906 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs750612085 pathogenic, MENTAL RETARDATION, AUTOSOMAL RECESSIVE 64 77,615,044(+) T/C genic_downstream_transcript_variant, intron_variant
rs757077698 pathogenic, MENTAL RETARDATION, AUTOSOMAL RECESSIVE 64 77,615,038(+) C/T genic_downstream_transcript_variant, intron_variant
rs1000002354 -- 77,615,381(+) C/T genic_downstream_transcript_variant, intron_variant
rs1000062081 -- 77,587,692(+) C/T genic_downstream_transcript_variant, intron_variant
rs1000112315 -- 77,609,585(+) T/G genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370906 Gene

Disorders for LOC105370906 Gene

MalaCards: The human disease database

(1) MalaCards diseases for LOC105370906 Gene - From: GeneCards

Disorder Aliases PubMed IDs
mental retardation, autosomal recessive 64
  • mrt64
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LOC105370906: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370906 Gene

Publications for LOC105370906 Gene

No publications were found for LOC105370906 Gene.

No data available for External Links for LOC105370906 Gene

Products for LOC105370906 Gene

Sources for LOC105370906 Gene

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