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Aliases for LOC105370886 Gene

Subcategory (RNA class) for LOC105370886 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370886 Gene

  • Uncharacterized LOC105370886 3

External Ids for LOC105370886 Gene

Previous GeneCards Identifiers for LOC105370886 Gene

  • GC15U901884

Summaries for LOC105370886 Gene

GeneCards Summary for LOC105370886 Gene

LOC105370886 (Uncharacterized LOC105370886) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370886 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370886 Gene

Genomics for LOC105370886 Gene

GeneHancer (GH) Regulatory Elements for LOC105370886 Gene

Promoters and enhancers for LOC105370886 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J071092 Enhancer 1.1 Ensembl ENCODE dbSUPER 600.7 -0.6 -593 1.7 CREB1 RFX1 BMI1 MAX NFYB ZNF592 RFX5 SIN3A GATA3 JUND LOC105370886 THSD4
GH15J071091 Enhancer 0.6 ENCODE dbSUPER 600.7 +1.3 1306 0.1 PRDM1 ZFHX2 CTCF LOC105370886 RPL5P3
GH15J071078 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +13.0 13027 3.7 ZNF384 NCOA3 FOSL2 CREB1 PKNOX1 ZIC2 RFX1 ZEB2 TCF7L2 ZNF561 CT62 THSD4 LOC105370886 RPL5P3
GH15J071082 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +9.8 9776 2.1 ZNF121 NCOA3 ZNF548 ZNF404 MZF1 ZNF680 ZNF560 ZNF704 ZNF547 ZNF331 ENSG00000212664 LRRC49 THAP10 CT62 LARP6 ENSG00000259744 TLE3 LOC105370886 RPL5P3
GH15J071070 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 +21.9 21873 1.6 NCOA3 CREB1 TARDBP CTBP1 ZKSCAN1 ZNF592 ZNF207 ZNF217 DPF2 GATAD2B CT62 RPL5P3 LOC105370886
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370886 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370886 Gene

Genomic Locations for LOC105370886 Gene
chr15:71,091,407-71,093,078
(GRCh38/hg38)
Size:
1,672 bases
Orientation:
Minus strand

Genomic View for LOC105370886 Gene

Genes around LOC105370886 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370886 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370886 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370886 Gene

Proteins for LOC105370886 Gene

Post-translational modifications for LOC105370886 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370886 Gene

Domains & Families for LOC105370886 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370886 Gene

Function for LOC105370886 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370886 Gene

Localization for LOC105370886 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370886 Gene

Pathways & Interactions for LOC105370886 Gene

PathCards logo

SuperPathways for LOC105370886 Gene

No Data Available

Interacting Proteins for LOC105370886 Gene

Gene Ontology (GO) - Biological Process for LOC105370886 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370886 Gene

Drugs & Compounds for LOC105370886 Gene

No Compound Related Data Available

Transcripts for LOC105370886 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370886 Gene

No ASD Table

Relevant External Links for LOC105370886 Gene

GeneLoc Exon Structure for
LOC105370886

No data available for mRNA/cDNA for LOC105370886 Gene

Expression for LOC105370886 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370886 Gene

Orthologs for LOC105370886 Gene

No data available for Orthologs and Evolution for LOC105370886 Gene

Paralogs for LOC105370886 Gene

No data available for Paralogs for LOC105370886 Gene

Variants for LOC105370886 Gene

Sequence variations from dbSNP and Humsavar for LOC105370886 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000199631 -- 71,095,020(-) A/G upstream_transcript_variant
rs1000290371 -- 71,092,331(-) G/T intron_variant
rs1000662219 -- 71,092,684(-) A/G intron_variant
rs1002366279 -- 71,093,847(-) C/T upstream_transcript_variant
rs1003958937 -- 71,092,235(-) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370886 Gene

Disorders for LOC105370886 Gene

No disorders were found for LOC105370886 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370886 Gene

Publications for LOC105370886 Gene

No publications were found for LOC105370886 Gene.

No data available for External Links for LOC105370886 Gene

Products for LOC105370886 Gene

Sources for LOC105370886 Gene

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