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Aliases for LOC105370854 Gene

Subcategory (RNA class) for LOC105370854 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370854 Gene

  • Uncharacterized LOC105370854 3

External Ids for LOC105370854 Gene

Previous GeneCards Identifiers for LOC105370854 Gene

  • GC15U901905
  • GC15M062836
  • GC15M064071
  • GC15M062838
  • GC15M063304
  • GC15M063410
  • GC15M063532
  • GC15M063654
  • GC15M063771
  • GC15M063897
  • GC15M063990

Summaries for LOC105370854 Gene

GeneCards Summary for LOC105370854 Gene

LOC105370854 (Uncharacterized LOC105370854) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370854 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370854 Gene

Genomics for LOC105370854 Gene

GeneHancer (GH) Regulatory Elements for LOC105370854 Gene

Promoters and enhancers for LOC105370854 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J062831 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 +4.3 4269 5.4 NCOA3 SP1 CREB1 RXRA TARDBP RFX1 CTBP1 FOXA2 SMARCA5 ZKSCAN1 USP3 VPS13C ENSG00000259370 LOC105370854 PIR40223 TLN2
GH15J062828 Enhancer 0.7 Ensembl 0.4 +9.6 9554 0.4 ELF3 NFIB TFE3 ZNF644 CEBPA GATAD2A RXRB ZKSCAN8 FOXA2 ZBTB17 PIR40223 ENSG00000259370 LOC105370854 TLN2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370854 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370854 Gene

Genomic Locations for LOC105370854 Gene
chr15:62,833,637-62,838,155
(GRCh38/hg38)
Size:
4,519 bases
Orientation:
Minus strand

Genomic View for LOC105370854 Gene

Genes around LOC105370854 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370854 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370854 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370854 Gene

Proteins for LOC105370854 Gene

Post-translational modifications for LOC105370854 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370854 Gene

Domains & Families for LOC105370854 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370854 Gene

Function for LOC105370854 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370854 Gene

Localization for LOC105370854 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370854 Gene

Pathways & Interactions for LOC105370854 Gene

PathCards logo

SuperPathways for LOC105370854 Gene

No Data Available

Interacting Proteins for LOC105370854 Gene

Gene Ontology (GO) - Biological Process for LOC105370854 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370854 Gene

Drugs & Compounds for LOC105370854 Gene

No Compound Related Data Available

Transcripts for LOC105370854 Gene

mRNA/cDNA for LOC105370854 Gene

(1) Additional mRNA sequences :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370854 Gene

No ASD Table

Relevant External Links for LOC105370854 Gene

GeneLoc Exon Structure for
LOC105370854

Expression for LOC105370854 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370854 Gene

Orthologs for LOC105370854 Gene

No data available for Orthologs and Evolution for LOC105370854 Gene

Paralogs for LOC105370854 Gene

No data available for Paralogs for LOC105370854 Gene

Variants for LOC105370854 Gene

Sequence variations from dbSNP and Humsavar for LOC105370854 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000063556 -- 62,855,658(-) A/G genic_upstream_transcript_variant, intron_variant
rs1000152789 -- 62,873,855(-) C/T genic_upstream_transcript_variant, intron_variant
rs1000199109 -- 62,875,889(-) C/A/T genic_upstream_transcript_variant, intron_variant
rs1000237489 -- 62,853,558(-) G/A genic_upstream_transcript_variant, intron_variant
rs1000301866 -- 62,858,789(-) T/G genic_upstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370854 Gene

Disorders for LOC105370854 Gene

No disorders were found for LOC105370854 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370854 Gene

Publications for LOC105370854 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

No data available for External Links for LOC105370854 Gene

Products for LOC105370854 Gene

Sources for LOC105370854 Gene

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