Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105370821 Gene

Subcategory (RNA class) for LOC105370821 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370821 Gene

  • Uncharacterized LOC105370821 3

External Ids for LOC105370821 Gene

Previous GeneCards Identifiers for LOC105370821 Gene

  • GC15U901876

Summaries for LOC105370821 Gene

GeneCards Summary for LOC105370821 Gene

LOC105370821 (Uncharacterized LOC105370821) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370821 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370821 Gene

Genomics for LOC105370821 Gene

GeneHancer (GH) Regulatory Elements for LOC105370821 Gene

Promoters and enhancers for LOC105370821 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J052676 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 600.7 +1.0 952 8.4 ZFX ELF3 MNT CBFA2T2 ZNF148 NKRF MLLT1 GTF2F1 CSDE1 TFE3 FAM214A LOC105370821 ENSG00000260618 ENSG00000259935 ENSG00000259712 GNB5
GH15J052708 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE 0.3 +30.2 30182 2 CEBPG SP7 SP1 SP5 IKZF1 RXRA CREB1 ZNF600 PRDM10 IKZF2 FAM214A LOC105370821
GH15J052675 Enhancer 0.8 Ensembl dbSUPER 0.7 -3.9 -3929 1 SMARCA5 CEBPG FOXA1 CEBPB ADNP NFXL1 ZBTB33 ZMYM3 KDM1A COPS2 ENSG00000259935 LOC105370821 FAM214A
GH15J052651 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 0.3 -26.6 -26603 3.7 SP1 ELF3 ZSCAN21 MAFK SP7 ELF1 MZF1 FOSL2 CREB1 CEBPG FAM214A GNB5 MIR1266 ENSG00000259935 LOC105370821
GH15J052657 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.3 -21.9 -21929 1 YY1 JUND ARPP19 ENSG00000259935 LOC105370821 FAM214A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370821 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370821 Gene

Genomic Locations for LOC105370821 Gene
chr15:52,679,430-52,690,175
(GRCh38/hg38)
Size:
10,746 bases
Orientation:
Plus strand

Genomic View for LOC105370821 Gene

Genes around LOC105370821 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370821 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370821 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370821 Gene

Proteins for LOC105370821 Gene

Post-translational modifications for LOC105370821 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370821 Gene

Domains & Families for LOC105370821 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370821 Gene

Function for LOC105370821 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370821 Gene

Localization for LOC105370821 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370821 Gene

Pathways & Interactions for LOC105370821 Gene

PathCards logo

SuperPathways for LOC105370821 Gene

No Data Available

Interacting Proteins for LOC105370821 Gene

Gene Ontology (GO) - Biological Process for LOC105370821 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370821 Gene

Drugs & Compounds for LOC105370821 Gene

No Compound Related Data Available

Transcripts for LOC105370821 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370821 Gene

No ASD Table

Relevant External Links for LOC105370821 Gene

GeneLoc Exon Structure for
LOC105370821

No data available for mRNA/cDNA for LOC105370821 Gene

Expression for LOC105370821 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370821 Gene

Orthologs for LOC105370821 Gene

No data available for Orthologs and Evolution for LOC105370821 Gene

Paralogs for LOC105370821 Gene

No data available for Paralogs for LOC105370821 Gene

Variants for LOC105370821 Gene

Sequence variations from dbSNP and Humsavar for LOC105370821 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000231756 -- 52,678,548(+) T/C upstream_transcript_variant
rs1000423371 -- 52,680,267(+) T/G intron_variant, non_coding_transcript_variant
rs1000442858 -- 52,688,175(+) A/G/T intron_variant
rs1000518034 -- 52,685,796(+) C/T intron_variant
rs1000576381 -- 52,681,609(+) G/A/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370821 Gene

Disorders for LOC105370821 Gene

No disorders were found for LOC105370821 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370821 Gene

Publications for LOC105370821 Gene

No publications were found for LOC105370821 Gene.

No data available for External Links for LOC105370821 Gene

Products for LOC105370821 Gene

Sources for LOC105370821 Gene

Content
Loading form....