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Aliases for LOC105370811 Gene

Subcategory (RNA class) for LOC105370811 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370811 Gene

  • Uncharacterized LOC105370811 3

External Ids for LOC105370811 Gene

Previous GeneCards Identifiers for LOC105370811 Gene

  • GC15U902098

Summaries for LOC105370811 Gene

GeneCards Summary for LOC105370811 Gene

LOC105370811 (Uncharacterized LOC105370811) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370811 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370811 Gene

Genomics for LOC105370811 Gene

GeneHancer (GH) Regulatory Elements for LOC105370811 Gene

Promoters and enhancers for LOC105370811 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J049492 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.7 +2.1 2084 3 CEBPG CEBPB JUN RCOR1 JUND FOS EP300 RAD21 RFX5 STAT3 FAM227B DTWD1 LOC105370811 PIR45931
GH15J049421 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 0.2 -64.4 -64416 7.2 CC2D1A CTCF GTF2F1 TRIM24 SP1 RAD21 ZBTB33 ARID2 REST ZSCAN4 FGF7 SECISBP2L FAM227B GALK2 ENSG00000259715 LOC105370811
GH15J049471 Enhancer 0.9 Ensembl ENCODE 0.4 -18.1 -18118 1.3 CTCF BACH1 MAFK IKZF1 TRIM22 HDAC1 IKZF2 PKNOX1 ZNF316 NFE2 SECISBP2L DTWD1 LOC105370811 FGF7 FAM227B
GH15J049496 Enhancer 0.7 Ensembl ENCODE 0.4 +6.6 6583 0.8 JUN JUND EP300 MAFF LOC105370811 PIR45931 FAM227B
GH15J049468 Enhancer 0.7 ENCODE 0.3 -21.3 -21272 0.1 SP1 CEBPA FOXA2 MAX JUND YY1 PRDM1 GABPA FOXA1 HNF4A LOC105370811 FGF7 FAM227B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370811 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370811 Gene

Genomic Locations for LOC105370811 Gene
chr15:49,490,017-49,557,758
(GRCh38/hg38)
Size:
67,742 bases
Orientation:
Plus strand

Genomic View for LOC105370811 Gene

Genes around LOC105370811 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370811 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370811 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370811 Gene

Proteins for LOC105370811 Gene

Post-translational modifications for LOC105370811 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370811 Gene

Domains & Families for LOC105370811 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370811 Gene

Function for LOC105370811 Gene

Phenotypes From GWAS Catalog for LOC105370811 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370811 Gene

Localization for LOC105370811 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370811 Gene

Pathways & Interactions for LOC105370811 Gene

PathCards logo

SuperPathways for LOC105370811 Gene

No Data Available

Interacting Proteins for LOC105370811 Gene

Gene Ontology (GO) - Biological Process for LOC105370811 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370811 Gene

Drugs & Compounds for LOC105370811 Gene

No Compound Related Data Available

Transcripts for LOC105370811 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370811 Gene

No ASD Table

Relevant External Links for LOC105370811 Gene

GeneLoc Exon Structure for
LOC105370811

No data available for mRNA/cDNA for LOC105370811 Gene

Expression for LOC105370811 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370811 Gene

Orthologs for LOC105370811 Gene

No data available for Orthologs and Evolution for LOC105370811 Gene

Paralogs for LOC105370811 Gene

No data available for Paralogs for LOC105370811 Gene

Variants for LOC105370811 Gene

Sequence variations from dbSNP and Humsavar for LOC105370811 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000044680 -- 49,491,848(+) G/A genic_upstream_transcript_variant, intron_variant
rs1000073913 -- 49,531,321(+) T/C genic_upstream_transcript_variant, intron_variant
rs1000206777 -- 49,553,428(+) A/G intron_variant
rs1000237703 -- 49,553,121(+) G/C intron_variant
rs1000250215 -- 49,544,686(+) C/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370811 Gene

Disorders for LOC105370811 Gene

No disorders were found for LOC105370811 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370811 Gene

Publications for LOC105370811 Gene

No publications were found for LOC105370811 Gene.

No data available for External Links for LOC105370811 Gene

Products for LOC105370811 Gene

Sources for LOC105370811 Gene

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