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Aliases for LOC105370804 Gene

Subcategory (RNA class) for LOC105370804 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370804 Gene

  • Uncharacterized LOC105370804 3

External Ids for LOC105370804 Gene

Previous GeneCards Identifiers for LOC105370804 Gene

  • GC15U901957

Summaries for LOC105370804 Gene

GeneCards Summary for LOC105370804 Gene

LOC105370804 (Uncharacterized LOC105370804) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370804 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370804 Gene

Genomics for LOC105370804 Gene

GeneHancer (GH) Regulatory Elements for LOC105370804 Gene

Promoters and enhancers for LOC105370804 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J047607 Enhancer 0.5 Ensembl 600.7 -0.8 -789 0.4 NR2F2 RCOR1 FEZF1 PRDM6 LOC105370804 ENSG00000259588 SEMA6D ENSG00000213862
GH15J047715 Promoter/Enhancer 2.3 VISTA EPDnew Ensembl ENCODE dbSUPER 0.1 -112.8 -112752 8.6 ZSCAN21 SP7 PRDM1 MZF1 ZNF547 GLIS2 PKNOX1 ZNF488 ZBTB8A ZNF600 SEMA6D ENSG00000213862 LOC105370804
GH15J047599 Enhancer 0.7 Ensembl ENCODE 0.4 +7.0 7011 2.4 CREB1 ZBTB20 GATA3 ATF2 SEMA6D ENSG00000259588 LOC105370804 ENSG00000259740
GH15J047602 Enhancer 0.3 FANTOM5 0.7 +4.6 4611 0.3 SEMA6D LOC105370804 ENSG00000259588 ENSG00000259740
GH15J047614 Enhancer 0.4 Ensembl 0.4 -7.5 -7489 0.6 CTCF RAD21 LOC105370804 ENSG00000213862 SEMA6D
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370804 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370804 Gene

Genomic Locations for LOC105370804 Gene
chr15:47,599,570-47,607,012
(GRCh38/hg38)
Size:
7,443 bases
Orientation:
Minus strand

Genomic View for LOC105370804 Gene

Genes around LOC105370804 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370804 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370804 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370804 Gene

Proteins for LOC105370804 Gene

Post-translational modifications for LOC105370804 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370804 Gene

Domains & Families for LOC105370804 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370804 Gene

Function for LOC105370804 Gene

Phenotypes From GWAS Catalog for LOC105370804 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370804 Gene

Localization for LOC105370804 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370804 Gene

Pathways & Interactions for LOC105370804 Gene

PathCards logo

SuperPathways for LOC105370804 Gene

No Data Available

Interacting Proteins for LOC105370804 Gene

Gene Ontology (GO) - Biological Process for LOC105370804 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370804 Gene

Drugs & Compounds for LOC105370804 Gene

No Compound Related Data Available

Transcripts for LOC105370804 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370804 Gene

No ASD Table

Relevant External Links for LOC105370804 Gene

GeneLoc Exon Structure for
LOC105370804

No data available for mRNA/cDNA for LOC105370804 Gene

Expression for LOC105370804 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370804 Gene

Orthologs for LOC105370804 Gene

No data available for Orthologs and Evolution for LOC105370804 Gene

Paralogs for LOC105370804 Gene

No data available for Paralogs for LOC105370804 Gene

Variants for LOC105370804 Gene

Sequence variations from dbSNP and Humsavar for LOC105370804 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000110728 -- 47,603,721(-) C/A/T intron_variant, non_coding_transcript_variant
rs1000240460 -- 47,609,611(-) A/G non_coding_transcript_variant
rs1000292821 -- 47,609,835(-) A/G non_coding_transcript_variant
rs1000305960 -- 47,602,346(-) C/T intron_variant, non_coding_transcript_variant
rs1000521806 -- 47,603,952(-) G/A intron_variant, non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370804 Gene

Disorders for LOC105370804 Gene

No disorders were found for LOC105370804 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370804 Gene

Publications for LOC105370804 Gene

No publications were found for LOC105370804 Gene.

No data available for External Links for LOC105370804 Gene

Products for LOC105370804 Gene

Sources for LOC105370804 Gene

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