Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105370790 Gene

Subcategory (RNA class) for LOC105370790 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370790 Gene

  • Uncharacterized LOC105370790 3

External Ids for LOC105370790 Gene

Previous GeneCards Identifiers for LOC105370790 Gene

  • GC15U901960

Summaries for LOC105370790 Gene

GeneCards Summary for LOC105370790 Gene

LOC105370790 (Uncharacterized LOC105370790) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370790 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370790 Gene

Genomics for LOC105370790 Gene

GeneHancer (GH) Regulatory Elements for LOC105370790 Gene

Promoters and enhancers for LOC105370790 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J041487 Enhancer 0.9 Ensembl dbSUPER 600.7 -1.3 -1331 1 POLR2A MLLT1 ZSCAN21 CDC5L IKZF1 EGR1 ZBTB33 ZNF488 IKZF2 ZSCAN4 LOC105370790 NDUFAF1 ITPKA GC15M041410
GH15J041486 Enhancer 0.5 Ensembl dbSUPER 600.7 +0.3 268 0.2 ZBTB33 LOC105370790 GC15M041410 RNU6-1169P
GH15J041481 Enhancer 1 Ensembl ENCODE dbSUPER 0.7 +3.6 3563 2.8 NKRF RELA IKZF1 BACH1 IKZF2 PKNOX1 CBFB DPF2 RUNX3 TARDBP NDUFAF1 RTF1 ZFYVE19 LOC105370790 RNU6-1169P GC15M041410
GH15J041489 Enhancer 0.9 ENCODE 0.7 -4.1 -4112 1.1 TRIM24 SP7 CREM SMARCA4 ZBED1 IKZF1 POLR2A ZNF488 IKZF2 ZEB2 NDUFAF1 RTF1 LOC105370790 ITPKA GC15M041410
GH15J041476 Enhancer 0.9 ENCODE 0.4 +9.2 9247 2 ZFX ZKSCAN8 ZNF148 MLLT1 BACH1 TRIM24 ZNF639 SMARCA4 MTA1 CAVIN1 MGA RPAP1 INO80 DNAJC17 ENSG00000261002 GANC RNU6-1169P ENSG00000260814 LTK TYRO3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370790 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370790 Gene

Genomic Locations for LOC105370790 Gene
chr15:41,479,207-41,486,369
(GRCh38/hg38)
Size:
7,163 bases
Orientation:
Minus strand

Genomic View for LOC105370790 Gene

Genes around LOC105370790 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370790 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370790 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370790 Gene

Proteins for LOC105370790 Gene

Post-translational modifications for LOC105370790 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370790 Gene

Domains & Families for LOC105370790 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370790 Gene

Function for LOC105370790 Gene

Phenotypes From GWAS Catalog for LOC105370790 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370790 Gene

Localization for LOC105370790 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370790 Gene

Pathways & Interactions for LOC105370790 Gene

PathCards logo

SuperPathways for LOC105370790 Gene

No Data Available

Interacting Proteins for LOC105370790 Gene

Gene Ontology (GO) - Biological Process for LOC105370790 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370790 Gene

Drugs & Compounds for LOC105370790 Gene

No Compound Related Data Available

Transcripts for LOC105370790 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370790 Gene

No ASD Table

Relevant External Links for LOC105370790 Gene

GeneLoc Exon Structure for
LOC105370790

No data available for mRNA/cDNA for LOC105370790 Gene

Expression for LOC105370790 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370790 Gene

Orthologs for LOC105370790 Gene

No data available for Orthologs and Evolution for LOC105370790 Gene

Paralogs for LOC105370790 Gene

No data available for Paralogs for LOC105370790 Gene

Variants for LOC105370790 Gene

Sequence variations from dbSNP and Humsavar for LOC105370790 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000051930 -- 41,485,548(-) G/A intron_variant
rs1000117666 -- 41,479,307(-) G/T non_coding_transcript_variant
rs1000428855 -- 41,481,415(-) A/G intron_variant
rs1000661250 -- 41,482,318(-) A/G intron_variant
rs1000697309 -- 41,487,502(-) T/C upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370790 Gene

Disorders for LOC105370790 Gene

No disorders were found for LOC105370790 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370790 Gene

Publications for LOC105370790 Gene

No publications were found for LOC105370790 Gene.

No data available for External Links for LOC105370790 Gene

Products for LOC105370790 Gene

Sources for LOC105370790 Gene

Content
Loading form....