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Aliases for LOC105370789 Gene

Subcategory (RNA class) for LOC105370789 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370789 Gene

  • Uncharacterized LOC105370789 3

External Ids for LOC105370789 Gene

Previous GeneCards Identifiers for LOC105370789 Gene

  • GC15U901896

Summaries for LOC105370789 Gene

GeneCards Summary for LOC105370789 Gene

LOC105370789 (Uncharacterized LOC105370789) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370789 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370789 Gene

Genomics for LOC105370789 Gene

GeneHancer (GH) Regulatory Elements for LOC105370789 Gene

Promoters and enhancers for LOC105370789 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J040959 Enhancer 0.7 ENCODE dbSUPER 600.7 -1.9 -1901 1.8 ZIC2 SMARCC1 POLR2A MAX ZBTB17 ZFHX2 EGR2 LOC105370789 OIP5-AS1 NDUFAF1 EHD4-AS1 SPINT1 GC15M040957
GH15J040962 Enhancer 0.6 FANTOM5 600.7 -0.2 -205 0.4 MTA3 POLR2A NFYB SREBF1 NFYC LOC105370789 NDUFAF1 KNSTRN GC15M040957
GH15J040966 Enhancer 0.7 Ensembl ENCODE 0.7 +4.1 4098 1.6 RXRA ZIC2 REST ZNF24 POLR2A NR2F2 GLIS1 DLL4 NDUFAF1 SPINT1 ENSG00000251161 VPS18 EXD1 CHP1 LOC105370789 GC15M040995
GH15J040972 Enhancer 0.8 Ensembl ENCODE 0.4 +9.8 9798 0.6 PRDM10 SP2 ZNF10 JUND ZFHX2 USF2 FOS SP3 DLL4 NDUFAF1 CHP1 EXD1 LOC105370789 GC15M040995
GH15J040981 Enhancer 0.7 Ensembl ENCODE 0.3 +21.7 21690 4.9 CTCF FOS JUND JUN CHAC1 DLL4 NDUFAF1 SPINT1 INO80 IVD GC15M040995 LOC105370789
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370789 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370789 Gene

Genomic Locations for LOC105370789 Gene
chr15:40,962,503-40,974,961
(GRCh38/hg38)
Size:
12,459 bases
Orientation:
Plus strand

Genomic View for LOC105370789 Gene

Genes around LOC105370789 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370789 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370789 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370789 Gene

Proteins for LOC105370789 Gene

Post-translational modifications for LOC105370789 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370789 Gene

Domains & Families for LOC105370789 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370789 Gene

Function for LOC105370789 Gene

Phenotypes From GWAS Catalog for LOC105370789 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370789 Gene

Localization for LOC105370789 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370789 Gene

Pathways & Interactions for LOC105370789 Gene

PathCards logo

SuperPathways for LOC105370789 Gene

No Data Available

Interacting Proteins for LOC105370789 Gene

Gene Ontology (GO) - Biological Process for LOC105370789 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370789 Gene

Drugs & Compounds for LOC105370789 Gene

No Compound Related Data Available

Transcripts for LOC105370789 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370789 Gene

No ASD Table

Relevant External Links for LOC105370789 Gene

GeneLoc Exon Structure for
LOC105370789

No data available for mRNA/cDNA for LOC105370789 Gene

Expression for LOC105370789 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370789 Gene

Orthologs for LOC105370789 Gene

No data available for Orthologs and Evolution for LOC105370789 Gene

Paralogs for LOC105370789 Gene

No data available for Paralogs for LOC105370789 Gene

Variants for LOC105370789 Gene

Sequence variations from dbSNP and Humsavar for LOC105370789 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000244158 -- 40,961,888(+) C/G/T upstream_transcript_variant
rs1000697273 -- 40,964,333(+) A/G intron_variant
rs1000815957 -- 40,963,979(+) A/G intron_variant
rs1001099505 -- 40,964,105(+) G/C intron_variant
rs1001132206 -- 40,964,489(+) CTAGCTA/CTA intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370789 Gene

Disorders for LOC105370789 Gene

No disorders were found for LOC105370789 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370789 Gene

Publications for LOC105370789 Gene

No publications were found for LOC105370789 Gene.

No data available for External Links for LOC105370789 Gene

Products for LOC105370789 Gene

Sources for LOC105370789 Gene

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