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Aliases for LOC105370752 Gene

Subcategory (RNA class) for LOC105370752 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370752 Gene

  • Uncharacterized LOC105370752 3

External Ids for LOC105370752 Gene

Previous GeneCards Identifiers for LOC105370752 Gene

  • GC15U901995

Summaries for LOC105370752 Gene

GeneCards Summary for LOC105370752 Gene

LOC105370752 (Uncharacterized LOC105370752) is an RNA Gene, and is affiliated with the ncRNA class. Diseases associated with LOC105370752 include Congenital Stationary Night Blindness.

Additional gene information for LOC105370752 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370752 Gene

Genomics for LOC105370752 Gene

GeneHancer (GH) Regulatory Elements for LOC105370752 Gene

Promoters and enhancers for LOC105370752 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J031022 Enhancer 0.7 ENCODE 600.7 -1.7 -1744 3.2 SP1 ELF3 PKNOX1 ZNF24 NR2C1 SOX13 MGA EHMT2 FOS GABPA LOC105370752 MTMR10 ENSG00000215302 LINC02352 ENSG00000261628 ENSG00000259720 TRPM1
GH15J031026 Enhancer 0.5 Ensembl 600.7 +0.1 95 0.2 NR2C1 MGA EHMT2 GABPA NR2C2 ZBTB40 L3MBTL2 LOC105370752 MTMR10 ENSG00000259720 MIR211 TRPM1
GH15J031027 Enhancer 0.2 Ensembl 600.7 +1.7 1695 0.2 LOC105370752 MTMR10 ENSG00000261628 ENSG00000259720 MIR211 TRPM1
GH15J031013 Enhancer 0.9 Ensembl ENCODE 0.4 -11.8 -11806 2.8 CEBPG SP1 RXRA POLR2A CEBPA GATAD2A SOX13 FOXA1 JUND ELF1 MTMR10 ENSG00000260382 ENSG00000215302 LOC105370752 ENSG00000259720 TRPM1
GH15J031031 Enhancer 0.7 Ensembl ENCODE 0.4 +6.9 6895 4.2 MLLT1 RUNX3 DPF2 GATA3 CTCF MAX SMARCE1 MTMR10 ENSG00000270055 CHRNA7 ENSG00000215302 LOC105370752 ENSG00000259720 MIR211 TRPM1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370752 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370752 Gene

Genomic Locations for LOC105370752 Gene
chr15:31,026,206-31,037,481
(GRCh38/hg38)
Size:
11,276 bases
Orientation:
Plus strand

Genomic View for LOC105370752 Gene

Genes around LOC105370752 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370752 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370752 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370752 Gene

Proteins for LOC105370752 Gene

Post-translational modifications for LOC105370752 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370752 Gene

Domains & Families for LOC105370752 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370752 Gene

Function for LOC105370752 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370752 Gene

Localization for LOC105370752 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370752 Gene

Pathways & Interactions for LOC105370752 Gene

PathCards logo

SuperPathways for LOC105370752 Gene

No Data Available

Interacting Proteins for LOC105370752 Gene

Gene Ontology (GO) - Biological Process for LOC105370752 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370752 Gene

Drugs & Compounds for LOC105370752 Gene

No Compound Related Data Available

Transcripts for LOC105370752 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370752 Gene

No ASD Table

Relevant External Links for LOC105370752 Gene

GeneLoc Exon Structure for
LOC105370752

No data available for mRNA/cDNA for LOC105370752 Gene

Expression for LOC105370752 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370752 Gene

Orthologs for LOC105370752 Gene

No data available for Orthologs and Evolution for LOC105370752 Gene

Paralogs for LOC105370752 Gene

No data available for Paralogs for LOC105370752 Gene

Variants for LOC105370752 Gene

Sequence variations from dbSNP and Humsavar for LOC105370752 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs12911350 likely-benign, Congenital Stationary Night Blindness, Recessive 31,037,741(+) G/A downstream_transcript_variant
rs150735353 uncertain-significance, Congenital Stationary Night Blindness, Recessive 31,035,615(+) G/C/T intron_variant, non_coding_transcript_variant
rs1555418784 likely-pathogenic, Congenital stationary night blindness 31,028,470(+) C/T intron_variant
rs182549235 likely-benign, uncertain-significance, not specified, Congenital Stationary Night Blindness, Recessive 31,026,219(+) C/G genic_upstream_transcript_variant, non_coding_transcript_variant, upstream_transcript_variant
rs200561247 uncertain-significance, Congenital Stationary Night Blindness, Recessive 31,028,434(+) A/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370752 Gene

Disorders for LOC105370752 Gene

MalaCards: The human disease database

(1) MalaCards diseases for LOC105370752 Gene - From: GeneCards

Disorder Aliases PubMed IDs
congenital stationary night blindness
  • congenital essential nyctalopia
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LOC105370752: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370752 Gene

Publications for LOC105370752 Gene

No publications were found for LOC105370752 Gene.

No data available for External Links for LOC105370752 Gene

Products for LOC105370752 Gene

Sources for LOC105370752 Gene

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