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Aliases for LOC105370705 Gene

Aliases for LOC105370705 Gene

  • Collagen Alpha-2(I) Chain-Like 3

External Ids for LOC105370705 Gene

Previous GeneCards Identifiers for LOC105370705 Gene

  • GC14U901554
  • GC14P023552
  • GC14P024514
  • GC14P023665
  • GC14P023781
  • GC14P023879
  • GC14P023942
  • GC14P024054
  • GC14P024172
  • GC14P024283
  • GC14P024396

Summaries for LOC105370705 Gene

GeneCards Summary for LOC105370705 Gene

LOC105370705 (Collagen Alpha-2(I) Chain-Like) is a Protein Coding gene.

Additional gene information for LOC105370705 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370705 Gene

Genomics for LOC105370705 Gene

GeneHancer (GH) Regulatory Elements for LOC105370705 Gene

Promoters and enhancers for LOC105370705 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J023056 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 600.7 +1.6 1574 3 HDGF MTA3 ZNF652 CC2D1A ZFX ELF3 CTCF MNT ZNF148 NKRF CDH24 LOC105370705 ACIN1 NGDN RBM23 PRMT5 PABPN1 MMP14 SLC22A17 LOC102724814
GH14J023055 Enhancer 0.7 ENCODE 600.7 -0.1 -56 0.2 ZBTB8A CTCF ZEB2 KMT2B KAT7 IKZF1 NR2F1 ZNF792 GABPB1 NFIC CDH24 LOC105370705 PSMB11
GH14J023045 Enhancer 0.6 Ensembl 0.4 -10.5 -10522 1.8 ZNF24 IKZF1 ZBTB20 CTBP1 ZBTB26 ELF1 JUN NFIA ZFP64 ZNF398 CDH24 RBM23 HAUS4 PSMB11 LOC105370705
GH14J023050 Enhancer 0.4 Ensembl 0.7 -4.7 -4722 1 IKZF1 MNT CDH24 LOC105370705 PSMB11
GH14J023043 Enhancer 0.4 Ensembl ENCODE 0.4 -12.0 -12022 0.8 PSMB11 CDH24 LOC105370705
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370705 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370705 Gene

Genomic Locations for LOC105370705 Gene
chr14:23,056,023-23,058,476
(GRCh38/hg38)
Size:
2,454 bases
Orientation:
Plus strand

Genomic View for LOC105370705 Gene

Genes around LOC105370705 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370705 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370705 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370705 Gene

Proteins for LOC105370705 Gene

Post-translational modifications for LOC105370705 Gene

No Post-translational modifications

Other Protein References for LOC105370705 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LOC105370705 Gene

Domains & Families for LOC105370705 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370705 Gene

Function for LOC105370705 Gene

Phenotypes From GWAS Catalog for LOC105370705 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370705 Gene

Localization for LOC105370705 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370705 Gene

Pathways & Interactions for LOC105370705 Gene

PathCards logo

SuperPathways for LOC105370705 Gene

No Data Available

Interacting Proteins for LOC105370705 Gene

Gene Ontology (GO) - Biological Process for LOC105370705 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370705 Gene

Drugs & Compounds for LOC105370705 Gene

No Compound Related Data Available

Transcripts for LOC105370705 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370705 Gene

No ASD Table

Relevant External Links for LOC105370705 Gene

GeneLoc Exon Structure for
LOC105370705

No data available for mRNA/cDNA for LOC105370705 Gene

Expression for LOC105370705 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370705 Gene

Orthologs for LOC105370705 Gene

No data available for Orthologs and Evolution for LOC105370705 Gene

Paralogs for LOC105370705 Gene

No data available for Paralogs for LOC105370705 Gene

Variants for LOC105370705 Gene

Sequence variations from dbSNP and Humsavar for LOC105370705 Gene

SNP ID Clin Chr 14 pos Variation AA Info Type
rs1000145646 -- 23,058,398(+) G/A 3_prime_UTR_variant
rs1000365059 -- 23,058,214(+) C/T intron_variant
rs1004598424 -- 23,055,899(+) C/A/T upstream_transcript_variant
rs1005126769 -- 23,058,302(+) G/T coding_sequence_variant, missense_variant
rs1005375616 -- 23,057,663(+) G/A coding_sequence_variant, missense_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370705 Gene

Disorders for LOC105370705 Gene

No disorders were found for LOC105370705 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370705 Gene

Publications for LOC105370705 Gene

No publications were found for LOC105370705 Gene.

No data available for External Links for LOC105370705 Gene

Products for LOC105370705 Gene

Sources for LOC105370705 Gene

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