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Aliases for LOC105370680 Gene

Subcategory (RNA class) for LOC105370680 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370680 Gene

  • Uncharacterized LOC105370680 3

External Ids for LOC105370680 Gene

Previous GeneCards Identifiers for LOC105370680 Gene

  • GC14U901831

Summaries for LOC105370680 Gene

GeneCards Summary for LOC105370680 Gene

LOC105370680 (Uncharacterized LOC105370680) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370680 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370680 Gene

Genomics for LOC105370680 Gene

GeneHancer (GH) Regulatory Elements for LOC105370680 Gene

Promoters and enhancers for LOC105370680 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J102516 Enhancer 1.2 ENCODE dbSUPER 600.7 -0.5 -468 1.6 ELF3 CTCF MNT ZNF148 NKRF MLLT1 ZSCAN21 ZBTB7A YY1 SP7 LOC105370680 ANKRD9 RCOR1 TECPR2 LOC105370679
GH14J102522 Enhancer 1.6 FANTOM5 ENCODE dbSUPER 0.4 +8.5 8544 5.9 HDGF SP1 CC2D1A CTCF ELF3 NKRF POLR2A MLLT1 ZNF121 GTF2F1 RCOR1 WDR20 TECPR2 MOK ANKRD9 ZNF839 CDC42BPB TRAF3 RNU6-244P DYNC1H1
GH14J102530 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.4 +14.2 14194 2.5 CEBPG CEBPA PKNOX1 RCOR2 ZNF24 CEBPB CHD2 RCOR1 MGA RFX1 ANKRD9 RCOR1 TRAF3 MIR4309 LOC105370680
GH14J102535 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +19.2 19179 1.3 PRDM10 SAP130 PRDM4 ZFHX2 NFIL3 ZNF223 ZMYM3 ZNF48 HLF ERF CINP RCOR1 TECPR2 AMN MOK MIR4309 LOC105370680
GH14J102533 Enhancer 0.7 Ensembl 0.4 +16.2 16185 0.4 ZNF121 TRIM24 GMEB1 RFX1 GTF2E2 HDAC1 NR2C1 MGA MTA3 HDAC2 RCOR1 ANKRD9 WDR20 TECPR2 CINP MIR4309 LOC105370680
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370680 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370680 Gene

Genomic Locations for LOC105370680 Gene
chr14:102,517,416-102,531,291
(GRCh38/hg38)
Size:
13,876 bases
Orientation:
Plus strand

Genomic View for LOC105370680 Gene

Genes around LOC105370680 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370680 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370680 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370680 Gene

Proteins for LOC105370680 Gene

Post-translational modifications for LOC105370680 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370680 Gene

Domains & Families for LOC105370680 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370680 Gene

Function for LOC105370680 Gene

Phenotypes From GWAS Catalog for LOC105370680 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370680 Gene

Localization for LOC105370680 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370680 Gene

Pathways & Interactions for LOC105370680 Gene

PathCards logo

SuperPathways for LOC105370680 Gene

No Data Available

Interacting Proteins for LOC105370680 Gene

Gene Ontology (GO) - Biological Process for LOC105370680 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370680 Gene

Drugs & Compounds for LOC105370680 Gene

No Compound Related Data Available

Transcripts for LOC105370680 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370680 Gene

No ASD Table

Relevant External Links for LOC105370680 Gene

GeneLoc Exon Structure for
LOC105370680

No data available for mRNA/cDNA for LOC105370680 Gene

Expression for LOC105370680 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370680 Gene

Orthologs for LOC105370680 Gene

No data available for Orthologs and Evolution for LOC105370680 Gene

Paralogs for LOC105370680 Gene

No data available for Paralogs for LOC105370680 Gene

Variants for LOC105370680 Gene

Sequence variations from dbSNP and Humsavar for LOC105370680 Gene

SNP ID Clin Chr 14 pos Variation AA Info Type
rs1000185683 -- 102,516,959(+) C/G upstream_transcript_variant
rs1000339373 -- 102,523,859(+) G/A genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000394736 -- 102,523,559(+) A/T genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000616998 -- 102,529,530(+) A/G intron_variant
rs1000640959 -- 102,516,741(+) G/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370680 Gene

Disorders for LOC105370680 Gene

No disorders were found for LOC105370680 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370680 Gene

Publications for LOC105370680 Gene

No publications were found for LOC105370680 Gene.

No data available for External Links for LOC105370680 Gene

Products for LOC105370680 Gene

Sources for LOC105370680 Gene

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