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Aliases for LOC105370627 Gene

Subcategory (RNA class) for LOC105370627 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370627 Gene

  • Uncharacterized LOC105370627 3

External Ids for LOC105370627 Gene

Previous GeneCards Identifiers for LOC105370627 Gene

  • GC14U901717

Summaries for LOC105370627 Gene

GeneCards Summary for LOC105370627 Gene

LOC105370627 (Uncharacterized LOC105370627) is an RNA Gene, and is affiliated with the ncRNA class. Diseases associated with LOC105370627 include Skin/Hair/Eye Pigmentation, Variation In, 6.

Additional gene information for LOC105370627 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370627 Gene

Genomics for LOC105370627 Gene

GeneHancer (GH) Regulatory Elements for LOC105370627 Gene

Promoters and enhancers for LOC105370627 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J092280 Enhancer 0.6 Ensembl ENCODE 0.3 -23.4 -23413 2 IKZF1 RUNX3 EBF1 GC14P092266 LOC105370627
GH14J092308 Enhancer 0.3 Ensembl 0.7 +3.9 3887 0.6 SREBF1 SLC24A4 LOC105370627
GH14J092317 Enhancer 0.4 Ensembl ENCODE 0.4 +13.3 13287 0.6 SLC24A4 LOC105370627
GH14J092318 Enhancer 0.4 ENCODE 0.4 +12.8 12796 0.1 USF1 FOS SLC24A4 LOC105370627
GH14J092277 Enhancer 0.2 ENCODE 0.3 -27.2 -27162 0.2 GC14P092266 LOC105370627
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370627 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370627 Gene

Genomic Locations for LOC105370627 Gene
chr14:92,304,414-92,319,650
(GRCh38/hg38)
Size:
15,237 bases
Orientation:
Plus strand

Genomic View for LOC105370627 Gene

Genes around LOC105370627 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370627 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370627 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370627 Gene

Proteins for LOC105370627 Gene

Post-translational modifications for LOC105370627 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370627 Gene

Domains & Families for LOC105370627 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370627 Gene

Function for LOC105370627 Gene

Phenotypes From GWAS Catalog for LOC105370627 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370627 Gene

Localization for LOC105370627 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370627 Gene

Pathways & Interactions for LOC105370627 Gene

PathCards logo

SuperPathways for LOC105370627 Gene

No Data Available

Interacting Proteins for LOC105370627 Gene

Gene Ontology (GO) - Biological Process for LOC105370627 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370627 Gene

Drugs & Compounds for LOC105370627 Gene

No Compound Related Data Available

Transcripts for LOC105370627 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370627 Gene

No ASD Table

Relevant External Links for LOC105370627 Gene

GeneLoc Exon Structure for
LOC105370627

No data available for mRNA/cDNA for LOC105370627 Gene

Expression for LOC105370627 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370627 Gene

Orthologs for LOC105370627 Gene

No data available for Orthologs and Evolution for LOC105370627 Gene

Paralogs for LOC105370627 Gene

No data available for Paralogs for LOC105370627 Gene

Variants for LOC105370627 Gene

Sequence variations from dbSNP and Humsavar for LOC105370627 Gene

SNP ID Clin Chr 14 pos Variation AA Info Type
rs12896399 association, Skin/hair/eye pigmentation, variation in, 6 92,307,319(+) G/T intron_variant
rs1000106749 -- 92,307,021(+) G/A intron_variant
rs1000174318 -- 92,313,308(+) C/G intron_variant
rs1000337092 -- 92,319,927(+) G/A downstream_transcript_variant
rs1000379834 -- 92,303,800(+) C/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370627 Gene

Disorders for LOC105370627 Gene

MalaCards: The human disease database

(1) MalaCards diseases for LOC105370627 Gene - From: GeneCards

Disorder Aliases PubMed IDs
skin/hair/eye pigmentation, variation in, 6
  • shep6
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LOC105370627: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370627 Gene

Publications for LOC105370627 Gene

No publications were found for LOC105370627 Gene.

No data available for External Links for LOC105370627 Gene

Products for LOC105370627 Gene

Sources for LOC105370627 Gene

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