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Aliases for LOC105370622 Gene

Subcategory (RNA class) for LOC105370622 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370622 Gene

  • Uncharacterized LOC105370622 3

External Ids for LOC105370622 Gene

Previous GeneCards Identifiers for LOC105370622 Gene

  • GC14U901555

Summaries for LOC105370622 Gene

GeneCards Summary for LOC105370622 Gene

LOC105370622 (Uncharacterized LOC105370622) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370622 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370622 Gene

Genomics for LOC105370622 Gene

GeneHancer (GH) Regulatory Elements for LOC105370622 Gene

Promoters and enhancers for LOC105370622 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J090696 Promoter/Enhancer 1.4 Ensembl ENCODE 600.7 +0.4 405 3.4 CTCF CEBPG ZSCAN21 SP7 PRDM1 MZF1 RAD21 ZNF221 ZBTB8A ZNF600 ENSG00000258716 LOC105370622 NRDE2 RPL21P11 CALM1 PPP4R3A TTC7B GC14M093090
GH14J090720 Enhancer 0.9 ENCODE dbSUPER 0.3 +23.1 23134 0.2 CC2D1A CBFA2T2 TRIM24 SMARCA4 DPF2 IKZF1 ZNF600 ZNF24 HDAC1 NRF1 NRDE2 GC14M093090 LOC105370622 TTC7B
GH14J090714 Enhancer 0.8 Ensembl ENCODE 0.4 +18.6 18627 2.3 SP1 CTBP1 ZNF217 DPF2 PRDM4 ZFHX2 GATAD2B GATA3 PRDM6 SMARCE1 TTC7B NRDE2 GC14M093090 LOC105370622
GH14J090721 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.3 +25.5 25543 3 ZNF189 FOS JUND ZBTB6 TTC7B GC14M093090 LOC105370622
GH14J090699 Enhancer 0.3 ENCODE 0.7 +3.3 3271 1.9 ZNF133 TTC7B LOC105370622 GC14M093090
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370622 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370622 Gene

Genomic Locations for LOC105370622 Gene
chr14:90,697,358-90,699,374
(GRCh38/hg38)
Size:
2,017 bases
Orientation:
Plus strand

Genomic View for LOC105370622 Gene

Genes around LOC105370622 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370622 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370622 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370622 Gene

Proteins for LOC105370622 Gene

Post-translational modifications for LOC105370622 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370622 Gene

Domains & Families for LOC105370622 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370622 Gene

Function for LOC105370622 Gene

Phenotypes From GWAS Catalog for LOC105370622 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370622 Gene

Localization for LOC105370622 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370622 Gene

Pathways & Interactions for LOC105370622 Gene

PathCards logo

SuperPathways for LOC105370622 Gene

No Data Available

Interacting Proteins for LOC105370622 Gene

Gene Ontology (GO) - Biological Process for LOC105370622 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370622 Gene

Drugs & Compounds for LOC105370622 Gene

No Compound Related Data Available

Transcripts for LOC105370622 Gene

mRNA/cDNA for LOC105370622 Gene

(1) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370622 Gene

No ASD Table

Relevant External Links for LOC105370622 Gene

GeneLoc Exon Structure for
LOC105370622

Expression for LOC105370622 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370622 Gene

Orthologs for LOC105370622 Gene

No data available for Orthologs and Evolution for LOC105370622 Gene

Paralogs for LOC105370622 Gene

No data available for Paralogs for LOC105370622 Gene

Variants for LOC105370622 Gene

Sequence variations from dbSNP and Humsavar for LOC105370622 Gene

SNP ID Clin Chr 14 pos Variation AA Info Type
rs1000295386 -- 90,698,776(+) C/T non_coding_transcript_variant
rs1000688396 -- 90,699,033(+) C/T non_coding_transcript_variant
rs1000964137 -- 90,699,711(+) C/G downstream_transcript_variant
rs1001956478 -- 90,697,795(+) C/T non_coding_transcript_variant
rs1002283097 -- 90,699,023(+) T/C non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370622 Gene

Disorders for LOC105370622 Gene

No disorders were found for LOC105370622 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370622 Gene

Publications for LOC105370622 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

No data available for External Links for LOC105370622 Gene

Products for LOC105370622 Gene

Sources for LOC105370622 Gene

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