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Aliases for LOC105370617 Gene

Subcategory (RNA class) for LOC105370617 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370617 Gene

  • Uncharacterized LOC105370617 3

External Ids for LOC105370617 Gene

Previous GeneCards Identifiers for LOC105370617 Gene

  • GC14U901622

Summaries for LOC105370617 Gene

GeneCards Summary for LOC105370617 Gene

LOC105370617 (Uncharacterized LOC105370617) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370617 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370617 Gene

Genomics for LOC105370617 Gene

GeneHancer (GH) Regulatory Elements for LOC105370617 Gene

Promoters and enhancers for LOC105370617 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J089613 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 600.7 -1.7 -1720 8.8 SP1 ZNF652 ELF3 MNT NKRF CEBPG ZNF384 ZNF687 CREM ZNF644 FOXN3 LOC105370617 ENSG00000252655 EML5 TDP1 RN7SKP107 GC14P089623 GC14P089586 ENSG00000259053
GH14J089641 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 0.3 +22.4 22418 1.3 ZNF652 ELF3 CEBPG TFE3 RELA SP1 PPARG ZNF644 KAT8 RXRA ENSG00000258792 LOC105370616 GC14P089628 LOC105370617 ENSG00000259053
GH14J089624 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +6.8 6764 2.9 NFIB PRDM1 MZF1 ZBTB33 PKNOX1 ZSCAN5C TSHZ1 PRDM4 CTCF WT1 ENSG00000252655 RN7SKP107 GC14P089628 LOC105370617 ENSG00000259053
GH14J089630 Promoter 0.8 Ensembl 0.4 +10.3 10284 0.4 PRDM1 EGR1 ZFHX2 EGR2 GC14P089628 LOC105370616 LOC105370617 ENSG00000258792 ENSG00000259053
GH14J089629 Enhancer 0.7 ENCODE dbSUPER 0.4 +11.7 11740 2.4 EGR1 POLR2A ZFHX2 EGR2 ENSG00000258792 GC14P089628 LOC105370616 LOC105370617 ENSG00000259053
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370617 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370617 Gene

Genomic Locations for LOC105370617 Gene
chr14:89,619,317-89,643,614
(GRCh38/hg38)
Size:
24,298 bases
Orientation:
Plus strand

Genomic View for LOC105370617 Gene

Genes around LOC105370617 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370617 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370617 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370617 Gene

Proteins for LOC105370617 Gene

Post-translational modifications for LOC105370617 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370617 Gene

Domains & Families for LOC105370617 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370617 Gene

Function for LOC105370617 Gene

Phenotypes From GWAS Catalog for LOC105370617 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370617 Gene

Localization for LOC105370617 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370617 Gene

Pathways & Interactions for LOC105370617 Gene

PathCards logo

SuperPathways for LOC105370617 Gene

No Data Available

Interacting Proteins for LOC105370617 Gene

Gene Ontology (GO) - Biological Process for LOC105370617 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370617 Gene

Drugs & Compounds for LOC105370617 Gene

No Compound Related Data Available

Transcripts for LOC105370617 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370617 Gene

No ASD Table

Relevant External Links for LOC105370617 Gene

GeneLoc Exon Structure for
LOC105370617

No data available for mRNA/cDNA for LOC105370617 Gene

Expression for LOC105370617 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370617 Gene

Orthologs for LOC105370617 Gene

No data available for Orthologs and Evolution for LOC105370617 Gene

Paralogs for LOC105370617 Gene

No data available for Paralogs for LOC105370617 Gene

Variants for LOC105370617 Gene

Sequence variations from dbSNP and Humsavar for LOC105370617 Gene

SNP ID Clin Chr 14 pos Variation AA Info Type
rs1000022547 -- 89,635,442(+) G/A intron_variant
rs1000119141 -- 89,623,085(+) T/A intron_variant
rs100016 -- 89,629,101(+) T/C non_coding_transcript_variant
rs1000286883 -- 89,625,186(+) G/T intron_variant
rs1000332294 -- 89,625,478(+) C/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370617 Gene

Disorders for LOC105370617 Gene

No disorders were found for LOC105370617 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370617 Gene

Publications for LOC105370617 Gene

No publications were found for LOC105370617 Gene.

No data available for External Links for LOC105370617 Gene

Products for LOC105370617 Gene

Sources for LOC105370617 Gene

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