LOC105370559 Gene (RNA Gene)

Uncharacterized LOC105370559

GC14M072382
GIFtS:
3

Aliases for LOC105370559 Gene

Subcategory (RNA class) for LOC105370559 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370559 Gene

  • Uncharacterized LOC105370559 3

External Ids for LOC105370559 Gene

Previous GeneCards Identifiers for LOC105370559 Gene

  • GC14U901738

Summaries for LOC105370559 Gene

GeneCards Summary for LOC105370559 Gene

LOC105370559 (Uncharacterized LOC105370559) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370559 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105370559 Gene

Genomics for LOC105370559 Gene

GeneHancer (GH) Regulatory Elements for LOC105370559 Gene

Promoters and enhancers for LOC105370559 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH14J072419 Enhancer 0.9 FANTOM5 Ensembl ENCODE 750.6 +0.4 418 2 CTCF RAD21 REST TRIM22 ZNF143 SMARCA5 RUNX3 BCLAF1 SMC3 CUX1 LOC105370559 DPF3 lnc-DCAF4-6 RGS6
GH14J072404 Enhancer 0.6 ENCODE 0.4 +16.5 16511 0.2 ZNF217 TARDBP CTBP1 DDX20 ESRRA DPF2 NFIB GATAD2B CUX1 GATA3 LOC100420966 lnc-DCAF4-6 LOC105370559 RGS6
GH14J072400 Enhancer 0.5 Ensembl 0.4 +18.7 18718 0.6 TCF7L2 ZNF217 NFIB PRDM10 CTBP1 CBFB EED RUNX3 lnc-DCAF4-6 LOC105370559 RGS6
GH14J072416 Enhancer 0.2 FANTOM5 0.6 +4.5 4451 0.4 LOC105370559 lnc-DCAF4-6 RGS6
GH14J072405 Enhancer 0.3 Ensembl 0.4 +15.7 15718 0.2 CTCF lnc-DCAF4-6 LOC105370559 RGS6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370559 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370559 Gene

Genomic Locations for LOC105370559 Gene
chr14:72,382,395-72,420,819
(GRCh38/hg38)
Size:
38,425 bases
Orientation:
Minus strand

Genomic View for LOC105370559 Gene

Genes around LOC105370559 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370559 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370559 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC105370559 Gene

Proteins for LOC105370559 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LOC105370559 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370559 Gene

Domains & Families for LOC105370559 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105370559 Gene

Function for LOC105370559 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for LOC105370559 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370559 Gene

Localization for LOC105370559 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370559 Gene

Pathways & Interactions for LOC105370559 Gene

PathCards logo

SuperPathways for LOC105370559 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105370559 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370559 Gene

Drugs & Compounds for LOC105370559 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LOC105370559 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370559 Gene

No ASD Table

Relevant External Links for LOC105370559 Gene

GeneLoc Exon Structure for
LOC105370559

No data available for mRNA/cDNA for LOC105370559 Gene

Expression for LOC105370559 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370559 Gene

Orthologs for LOC105370559 Gene

No data available for Orthologs and Evolution for LOC105370559 Gene

Paralogs for LOC105370559 Gene

No data available for Paralogs for LOC105370559 Gene

Variants for LOC105370559 Gene

Sequence variations from dbSNP and Humsavar for LOC105370559 Gene

SNP ID Clin Chr 14 pos Variation AA Info Type
rs1000075204 -- 72,418,985(-) A/T genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000078534 -- 72,414,834(-) C/T genic_upstream_transcript_variant, intron_variant
rs1000090869 -- 72,383,640(-) G/A intron_variant
rs1000110423 -- 72,415,245(-) G/C/T genic_upstream_transcript_variant, intron_variant
rs1000133969 -- 72,402,117(-) C/A/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370559 Gene

Disorders for LOC105370559 Gene

No disorders were found for LOC105370559 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370559 Gene

Publications for LOC105370559 Gene

No publications were found for LOC105370559 Gene.

No data available for External Links for LOC105370559 Gene

Products for LOC105370559 Gene

Sources for LOC105370559 Gene