Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105370538 Gene

Subcategory (RNA class) for LOC105370538 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370538 Gene

  • Uncharacterized LOC105370538 3

External Ids for LOC105370538 Gene

Previous GeneCards Identifiers for LOC105370538 Gene

  • GC14U901817

Summaries for LOC105370538 Gene

GeneCards Summary for LOC105370538 Gene

LOC105370538 (Uncharacterized LOC105370538) is an RNA Gene, and is affiliated with the ncRNA class. Diseases associated with LOC105370538 include Molybdenum Cofactor Deficiency, Complementation Group C.

Additional gene information for LOC105370538 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370538 Gene

Genomics for LOC105370538 Gene

GeneHancer (GH) Regulatory Elements for LOC105370538 Gene

Promoters and enhancers for LOC105370538 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J067189 Promoter 1.3 EPDnew Ensembl 600.7 +0.0 29 0.3 ZNF600 POLR2A SCRT2 SCRT1 MAFK ZNF48 FAM71D LOC105370538 ENSG00000258490
GH14J067191 Promoter 0.8 Ensembl 600.7 -0.3 -347 0.2 ZNF600 SCRT2 SCRT1 ZNF48 FAM71D LOC105370538 SF3B4P1
GH14J067185 Enhancer 0.8 ENCODE 0.7 +2.4 2351 2.6 ZNF652 SP7 SMARCA4 FOSL2 CREB1 POLR2A IKZF1 ZNF600 ZNF639 ZNF629 ATP6V1D PLEK2 LOC105370538 ENSG00000258490
GH14J067166 Enhancer 0.7 Ensembl 0.3 +22.8 22754 0.4 CC2D1A CTCF GTF2F1 RAD21 ARID2 REST TRIM22 ZNF512B MYNN ZC3H8 ATP6V1D LOC105370538 ENSG00000258490 GPHN
GH14J067181 Enhancer 0.4 UCNEbase 0.4 +7.7 7666 0.2 LOC105370538 ENSG00000258490 GPHN
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370538 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370538 Gene

Genomic Locations for LOC105370538 Gene
chr14:67,072,420-67,189,354
(GRCh38/hg38)
Size:
116,935 bases
Orientation:
Minus strand

Genomic View for LOC105370538 Gene

Genes around LOC105370538 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370538 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370538 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370538 Gene

Proteins for LOC105370538 Gene

Post-translational modifications for LOC105370538 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370538 Gene

Domains & Families for LOC105370538 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370538 Gene

Function for LOC105370538 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370538 Gene

Localization for LOC105370538 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370538 Gene

Pathways & Interactions for LOC105370538 Gene

PathCards logo

SuperPathways for LOC105370538 Gene

No Data Available

Interacting Proteins for LOC105370538 Gene

Gene Ontology (GO) - Biological Process for LOC105370538 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370538 Gene

Drugs & Compounds for LOC105370538 Gene

No Compound Related Data Available

Transcripts for LOC105370538 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370538 Gene

No ASD Table

Relevant External Links for LOC105370538 Gene

GeneLoc Exon Structure for
LOC105370538

No data available for mRNA/cDNA for LOC105370538 Gene

Expression for LOC105370538 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370538 Gene

Orthologs for LOC105370538 Gene

No data available for Orthologs and Evolution for LOC105370538 Gene

Paralogs for LOC105370538 Gene

No data available for Paralogs for LOC105370538 Gene

Variants for LOC105370538 Gene

Sequence variations from dbSNP and Humsavar for LOC105370538 Gene

SNP ID Clin Chr 14 pos Variation AA Info Type
rs1060499577 uncertain-significance, Molybdenum cofactor deficiency, complementation group C 67,143,444(-) G/A intron_variant
rs111956954 benign, Molybdenum cofactor deficiency, complementation group C 67,111,857(-) A/C intron_variant
rs142608987 uncertain-significance, Molybdenum cofactor deficiency, complementation group C 67,180,819(-) G/C genic_upstream_transcript_variant, intron_variant
rs150799851 likely-benign, Molybdenum cofactor deficiency, complementation group C 67,165,222(-) A/C genic_upstream_transcript_variant, intron_variant
rs1555490611 uncertain-significance, Molybdenum cofactor deficiency, complementation group C 67,100,856(-) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370538 Gene

Disorders for LOC105370538 Gene

MalaCards: The human disease database

(1) MalaCards diseases for LOC105370538 Gene - From: GeneCards

Disorder Aliases PubMed IDs
molybdenum cofactor deficiency, complementation group c
  • mocodc
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LOC105370538: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370538 Gene

Publications for LOC105370538 Gene

No publications were found for LOC105370538 Gene.

No data available for External Links for LOC105370538 Gene

Products for LOC105370538 Gene

Sources for LOC105370538 Gene

Content
Loading form....