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Aliases for LOC105370380 Gene

Subcategory (RNA class) for LOC105370380 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370380 Gene

  • Uncharacterized LOC105370380 3

External Ids for LOC105370380 Gene

Previous GeneCards Identifiers for LOC105370380 Gene

  • GC13U901221

Summaries for LOC105370380 Gene

GeneCards Summary for LOC105370380 Gene

LOC105370380 (Uncharacterized LOC105370380) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370380 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370380 Gene

Genomics for LOC105370380 Gene

GeneHancer (GH) Regulatory Elements for LOC105370380 Gene

Promoters and enhancers for LOC105370380 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J113816 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 600.7 +0.5 461 2.8 CTCF ZNF148 ZBTB7A SP7 SP1 RAD21 GLIS2 ZNF600 ZIC2 REST LOC105370380 TMEM255B GAS6-AS1 ADPRHL1 GAS6
GH13J113815 Promoter/Enhancer 1.4 Ensembl ENCODE dbSUPER 600.7 -1.8 -1758 1.3 CC2D1A RFX1 ZNF143 POLR2A ZFX MNT CBFB ZNF766 ELF1 GABPA GAS6-AS1 LOC105370380 TMEM255B
GH13J113819 Promoter/Enhancer 1.3 Ensembl ENCODE dbSUPER 0.7 +3.9 3882 3.4 NFIB REST MGA ZBTB17 FOS MNT POLR2A JUND NFIC FOSL2 TMEM255B GAS6-AS1 LOC105370380 GAS6
GH13J113859 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 +44.7 44684 6.1 SP1 ZFX ZNF148 SP7 ZNF639 EGR1 GLIS2 ZNF24 IKZF1 ZBTB8A GAS6 GAS6-DT CDC16 UPF3A GAS6-AS1 TMEM255B LOC105370380
GH13J113836 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 0.3 +21.7 21728 4.8 ZBTB7A SP7 SP1 GLIS2 POLR2A ZBTB8A ZNF600 PRDM10 ZIC2 ZSCAN4 CDC16 PCID2 CHAMP1 GAS6-AS1 TMEM255B GAS6 LOC105370380
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370380 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370380 Gene

Genomic Locations for LOC105370380 Gene
chr13:113,817,492-113,820,631
(GRCh38/hg38)
Size:
3,140 bases
Orientation:
Plus strand

Genomic View for LOC105370380 Gene

Genes around LOC105370380 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370380 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370380 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370380 Gene

Proteins for LOC105370380 Gene

Post-translational modifications for LOC105370380 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370380 Gene

Domains & Families for LOC105370380 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370380 Gene

Function for LOC105370380 Gene

Phenotypes From GWAS Catalog for LOC105370380 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370380 Gene

Localization for LOC105370380 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370380 Gene

Pathways & Interactions for LOC105370380 Gene

PathCards logo

SuperPathways for LOC105370380 Gene

No Data Available

Interacting Proteins for LOC105370380 Gene

Gene Ontology (GO) - Biological Process for LOC105370380 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370380 Gene

Drugs & Compounds for LOC105370380 Gene

No Compound Related Data Available

Transcripts for LOC105370380 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370380 Gene

No ASD Table

Relevant External Links for LOC105370380 Gene

GeneLoc Exon Structure for
LOC105370380

No data available for mRNA/cDNA for LOC105370380 Gene

Expression for LOC105370380 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370380 Gene

Orthologs for LOC105370380 Gene

No data available for Orthologs and Evolution for LOC105370380 Gene

Paralogs for LOC105370380 Gene

No data available for Paralogs for LOC105370380 Gene

Variants for LOC105370380 Gene

Sequence variations from dbSNP and Humsavar for LOC105370380 Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs1000229234 -- 113,816,334(+) G/C intron_variant
rs1000309360 -- 113,820,468(+) T/C non_coding_transcript_variant
rs1000528913 -- 113,819,802(+) G/A non_coding_transcript_variant
rs1000707942 -- 113,820,108(+) C/T non_coding_transcript_variant
rs1000829744 -- 113,816,741(+) CTTCCTT/CTT intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370380 Gene

Disorders for LOC105370380 Gene

No disorders were found for LOC105370380 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370380 Gene

Publications for LOC105370380 Gene

No publications were found for LOC105370380 Gene.

No data available for External Links for LOC105370380 Gene

Products for LOC105370380 Gene

Sources for LOC105370380 Gene

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