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Aliases for LOC105370227 Gene

Subcategory (RNA class) for LOC105370227 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370227 Gene

  • Uncharacterized LOC105370227 3

External Ids for LOC105370227 Gene

Previous GeneCards Identifiers for LOC105370227 Gene

  • GC13U901219

Summaries for LOC105370227 Gene

GeneCards Summary for LOC105370227 Gene

LOC105370227 (Uncharacterized LOC105370227) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370227 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370227 Gene

Genomics for LOC105370227 Gene

GeneHancer (GH) Regulatory Elements for LOC105370227 Gene

Promoters and enhancers for LOC105370227 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J060161 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 600.7 -0.1 -93 5.2 CC2D1A ZFX SP1 ELF3 CBFA2T2 NKRF POLR2A GTF2F1 CSDE1 ZNF687 DIAPH3 LOC105370227 TDRD3 GC13M060165 DIAPH3-AS2
GH13J060166 Enhancer 0.3 ENCODE 0.7 +2.9 2906 0.2 ZNF664 GC13M060166 GC13M060165 DIAPH3-AS2 DIAPH3 LOC105370227
GH13J060169 Enhancer 0.4 ENCODE 0.4 +5.6 5574 1.2 ZNF10 GATA3 CTCF DIAPH3-AS2 DIAPH3 GC13M060166 LOC105370227 GC13M060188 RNY4P28
GH13J060167 Enhancer 0.2 ENCODE 0.7 +3.3 3256 0.1 GC13M060165 GC13M060166 DIAPH3-AS2 LOC105370227 GC13M060188 RNY4P28
GH13J060171 Enhancer 0.2 ENCODE 0.4 +8.2 8238 0.7 DIAPH3-AS2 LOC105370227 GC13M060166 GC13M060188 RNY4P28
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370227 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370227 Gene

Genomic Locations for LOC105370227 Gene
chr13:60,164,076-60,172,615
(GRCh38/hg38)
Size:
8,540 bases
Orientation:
Plus strand

Genomic View for LOC105370227 Gene

Genes around LOC105370227 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370227 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370227 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370227 Gene

Proteins for LOC105370227 Gene

Post-translational modifications for LOC105370227 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370227 Gene

Domains & Families for LOC105370227 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370227 Gene

Function for LOC105370227 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370227 Gene

Localization for LOC105370227 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370227 Gene

Pathways & Interactions for LOC105370227 Gene

PathCards logo

SuperPathways for LOC105370227 Gene

No Data Available

Interacting Proteins for LOC105370227 Gene

Gene Ontology (GO) - Biological Process for LOC105370227 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370227 Gene

Drugs & Compounds for LOC105370227 Gene

No Compound Related Data Available

Transcripts for LOC105370227 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370227 Gene

No ASD Table

Relevant External Links for LOC105370227 Gene

GeneLoc Exon Structure for
LOC105370227

No data available for mRNA/cDNA for LOC105370227 Gene

Expression for LOC105370227 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370227 Gene

Orthologs for LOC105370227 Gene

No data available for Orthologs and Evolution for LOC105370227 Gene

Paralogs for LOC105370227 Gene

No data available for Paralogs for LOC105370227 Gene

Variants for LOC105370227 Gene

Sequence variations from dbSNP and Humsavar for LOC105370227 Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs202198529 likely-benign, not specified 60,163,611(+) C/A/T upstream_transcript_variant
rs905455195 likely-benign, not specified 60,163,734(+) C/G upstream_transcript_variant
rs1000083212 -- 60,165,447(+) G/A intron_variant
rs1000655059 -- 60,168,966(+) A/T intron_variant
rs1000914788 -- 60,162,404(+) G/C upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370227 Gene

Disorders for LOC105370227 Gene

No disorders were found for LOC105370227 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370227 Gene

Publications for LOC105370227 Gene

No publications were found for LOC105370227 Gene.

No data available for External Links for LOC105370227 Gene

Products for LOC105370227 Gene

Sources for LOC105370227 Gene

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