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Aliases for LOC105370203 Gene

Subcategory (RNA class) for LOC105370203 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370203 Gene

  • Uncharacterized LOC105370203 3

External Ids for LOC105370203 Gene

Previous GeneCards Identifiers for LOC105370203 Gene

  • GC13U901163

Summaries for LOC105370203 Gene

GeneCards Summary for LOC105370203 Gene

LOC105370203 (Uncharacterized LOC105370203) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370203 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370203 Gene

Genomics for LOC105370203 Gene

GeneHancer (GH) Regulatory Elements for LOC105370203 Gene

Promoters and enhancers for LOC105370203 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J049247 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 600.7 -0.4 -358 2.4 SP1 ZFX NKRF POLR2A CEBPG GTF2F1 CSDE1 ZSCAN21 BACH1 SP7 CDADC1 LOC105370203 CAB39L FNDC3A GC13M049249 GC13M049248
GH13J049219 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE 0.3 +27.7 27652 0.8 MNT ZBTB8A CTCF POLR2A EZH2 CTBP1 MBD1 RNF2 TFDP1 GABPB1 MLNR SETDB2 TRIM13 KCNRG PPP1R26P1 FNDC3A OGFOD1P1 LOC105370203
GH13J049214 Promoter/Enhancer 1.3 Ensembl ENCODE 0.3 +32.9 32910 1.6 ELF3 CEBPG SP1 SP5 ZNF644 EGR1 KAT8 RXRA CEBPA GATAD2A FNDC3A OGFOD1P1 MLNR LOC105370203
GH13J049240 Enhancer 0.8 FANTOM5 Ensembl 0.4 +7.7 7652 0.4 CTCF RAD21 ZSCAN5C SMARCA5 ZNF580 GATA3 ZNF654 ZNF660 ZNF143 CAB39L MLNR GC13P049237 LOC105370203
GH13J049224 Enhancer 0.7 Ensembl 0.3 +22.5 22452 1.2 ZNF121 CEBPG SP1 ZNF644 RXRA CEBPA GATAD2A CEBPB TCF7 ATF3 FNDC3A THAP12P10 MLNR LOC105370203
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370203 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370203 Gene

Genomic Locations for LOC105370203 Gene
chr13:49,203,295-49,247,853
(GRCh38/hg38)
Size:
44,559 bases
Orientation:
Minus strand

Genomic View for LOC105370203 Gene

Genes around LOC105370203 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370203 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370203 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370203 Gene

Proteins for LOC105370203 Gene

Post-translational modifications for LOC105370203 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370203 Gene

Domains & Families for LOC105370203 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370203 Gene

Function for LOC105370203 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370203 Gene

Localization for LOC105370203 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370203 Gene

Pathways & Interactions for LOC105370203 Gene

PathCards logo

SuperPathways for LOC105370203 Gene

No Data Available

Interacting Proteins for LOC105370203 Gene

Gene Ontology (GO) - Biological Process for LOC105370203 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370203 Gene

Drugs & Compounds for LOC105370203 Gene

No Compound Related Data Available

Transcripts for LOC105370203 Gene

mRNA/cDNA for LOC105370203 Gene

(2) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370203 Gene

No ASD Table

Relevant External Links for LOC105370203 Gene

GeneLoc Exon Structure for
LOC105370203

Expression for LOC105370203 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370203 Gene

Orthologs for LOC105370203 Gene

No data available for Orthologs and Evolution for LOC105370203 Gene

Paralogs for LOC105370203 Gene

No data available for Paralogs for LOC105370203 Gene

Variants for LOC105370203 Gene

Sequence variations from dbSNP and Humsavar for LOC105370203 Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs1000061414 -- 49,236,401(-) G/A intron_variant
rs1000925907 -- 49,238,485(-) G/A intron_variant
rs1001032248 -- 49,242,456(-) G/A intron_variant
rs1001231263 -- 49,236,034(-) G/A intron_variant
rs1001360149 -- 49,238,183(-) G/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370203 Gene

Disorders for LOC105370203 Gene

No disorders were found for LOC105370203 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370203 Gene

Publications for LOC105370203 Gene

No publications were found for LOC105370203 Gene.

No data available for External Links for LOC105370203 Gene

Products for LOC105370203 Gene

Sources for LOC105370203 Gene

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