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Aliases for LOC105370201 Gene

Subcategory (RNA class) for LOC105370201 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370201 Gene

  • Uncharacterized LOC105370201 3

External Ids for LOC105370201 Gene

Previous GeneCards Identifiers for LOC105370201 Gene

  • GC13U901310

Summaries for LOC105370201 Gene

GeneCards Summary for LOC105370201 Gene

LOC105370201 (Uncharacterized LOC105370201) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370201 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370201 Gene

Genomics for LOC105370201 Gene

GeneHancer (GH) Regulatory Elements for LOC105370201 Gene

Promoters and enhancers for LOC105370201 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J048567 Promoter/Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 600.7 -0.1 -90 5.9 ELF3 CEBPG SOX13 CEBPA SP1 RCOR2 PKNOX1 TCF7 FOXA2 YY1 LOC105370201 RB1 RCBTB2 LPAR6 RB1-DT FNDC3A LINC01077 GC13P048533
GH13J048561 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +7.6 7615 2.3 SP1 RELA CREM MLLT1 ZBED1 IKZF1 BACH1 IKZF2 TRIM22 CBFB RCBTB2 LPAR6 RB1 FNDC3A ITM2B CYSLTR2 LOC105370201 GC13P048533
GH13J048535 Promoter/Enhancer 1.2 EPDnew Ensembl dbSUPER 0.3 +34.1 34070 0.4 RCBTB2 GC13P048533 LOC105370201 RB1
GH13J048564 Enhancer 0.7 ENCODE dbSUPER 0.4 +5.6 5631 0.2 MLLT1 ZBTB17 FOSL1 NR2F2 JUND LOC105370201 GC13P048533 RB1
GH13J048542 Enhancer 0.8 ENCODE dbSUPER 0.3 +27.1 27061 1.5 ZNF547 RXRA SP1 POLR2A NR2F2 RAD21 ZNF335 HNF4A FEZF1 CTCF RB1 LINC00462 GC13P048533 LOC105370201
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370201 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370201 Gene

Genomic Locations for LOC105370201 Gene
chr13:48,567,598-48,569,871
(GRCh38/hg38)
Size:
2,274 bases
Orientation:
Minus strand

Genomic View for LOC105370201 Gene

Genes around LOC105370201 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370201 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370201 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370201 Gene

Proteins for LOC105370201 Gene

Post-translational modifications for LOC105370201 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370201 Gene

Domains & Families for LOC105370201 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370201 Gene

Function for LOC105370201 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370201 Gene

Localization for LOC105370201 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370201 Gene

Pathways & Interactions for LOC105370201 Gene

PathCards logo

SuperPathways for LOC105370201 Gene

No Data Available

Interacting Proteins for LOC105370201 Gene

Gene Ontology (GO) - Biological Process for LOC105370201 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370201 Gene

Drugs & Compounds for LOC105370201 Gene

No Compound Related Data Available

Transcripts for LOC105370201 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370201 Gene

No ASD Table

Relevant External Links for LOC105370201 Gene

GeneLoc Exon Structure for
LOC105370201

No data available for mRNA/cDNA for LOC105370201 Gene

Expression for LOC105370201 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370201 Gene

Orthologs for LOC105370201 Gene

No data available for Orthologs and Evolution for LOC105370201 Gene

Paralogs for LOC105370201 Gene

No data available for Paralogs for LOC105370201 Gene

Variants for LOC105370201 Gene

Sequence variations from dbSNP and Humsavar for LOC105370201 Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs1000123740 -- 48,571,612(-) G/A upstream_transcript_variant
rs1000367840 -- 48,567,338(-) G/A/T downstream_transcript_variant
rs1000433100 -- 48,571,387(-) C/T upstream_transcript_variant
rs1000964836 -- 48,568,642(-) G/A intron_variant
rs1001424717 -- 48,570,809(-) G/A/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370201 Gene

Disorders for LOC105370201 Gene

No disorders were found for LOC105370201 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370201 Gene

Publications for LOC105370201 Gene

No publications were found for LOC105370201 Gene.

No data available for External Links for LOC105370201 Gene

Products for LOC105370201 Gene

Sources for LOC105370201 Gene

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