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Aliases for LOC105370190 Gene

Subcategory (RNA class) for LOC105370190 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370190 Gene

  • Uncharacterized LOC105370190 3

External Ids for LOC105370190 Gene

Previous GeneCards Identifiers for LOC105370190 Gene

  • GC13U901102

Summaries for LOC105370190 Gene

GeneCards Summary for LOC105370190 Gene

LOC105370190 (Uncharacterized LOC105370190) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370190 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370190 Gene

Genomics for LOC105370190 Gene

GeneHancer (GH) Regulatory Elements for LOC105370190 Gene

Promoters and enhancers for LOC105370190 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J045235 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +3.9 3892 8.2 MLLT1 ZNF384 ZSCAN21 SP7 PRDM1 ZNF644 MZF1 SMARCA4 POLR2A DPF2 COG3 GTF2F2 KCTD4 SLC25A30 LOC105370190
GH13J045252 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -11.1 -11074 4.5 ELF3 CEBPG ZNF24 TRIM24 PPARG ZNF644 KAT8 SOX13 PRDM10 CEBPA GTF2F2 KCTD4 ENSG00000270381 LOC105370190
GH13J045218 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 +24.1 24092 3.8 MAFK ZBTB7A SP7 SP1 PRDM1 ZNF644 KAT8 PKNOX1 RXRA CEBPA KCTD4 LOC105370190 GTF2F2
GH13J045257 Enhancer 0.9 Ensembl ENCODE 0.4 -14.6 -14608 1.6 SP1 POLR2A RXRA CEBPA ATF7 CEBPB JUN JUND RUNX3 ATF2 KCTD4 ENSG00000270381 LOC105370190 GTF2F2
GH13J045231 Enhancer 0.7 Ensembl dbSUPER 0.4 +11.7 11692 0.6 RFX1 RFX3 ZBTB44 BMI1 PRDM6 KCTD4 LOC105370190 GTF2F2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370190 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370190 Gene

Genomic Locations for LOC105370190 Gene
chr13:45,224,489-45,243,393
(GRCh38/hg38)
Size:
18,905 bases
Orientation:
Minus strand

Genomic View for LOC105370190 Gene

Genes around LOC105370190 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370190 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370190 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370190 Gene

Proteins for LOC105370190 Gene

Post-translational modifications for LOC105370190 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370190 Gene

Domains & Families for LOC105370190 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370190 Gene

Function for LOC105370190 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370190 Gene

Localization for LOC105370190 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370190 Gene

Pathways & Interactions for LOC105370190 Gene

PathCards logo

SuperPathways for LOC105370190 Gene

No Data Available

Interacting Proteins for LOC105370190 Gene

Gene Ontology (GO) - Biological Process for LOC105370190 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370190 Gene

Drugs & Compounds for LOC105370190 Gene

No Compound Related Data Available

Transcripts for LOC105370190 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370190 Gene

No ASD Table

Relevant External Links for LOC105370190 Gene

GeneLoc Exon Structure for
LOC105370190

No data available for mRNA/cDNA for LOC105370190 Gene

Expression for LOC105370190 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370190 Gene

Orthologs for LOC105370190 Gene

No data available for Orthologs and Evolution for LOC105370190 Gene

Paralogs for LOC105370190 Gene

No data available for Paralogs for LOC105370190 Gene

Variants for LOC105370190 Gene

Sequence variations from dbSNP and Humsavar for LOC105370190 Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs1000207201 -- 45,229,749(-) T/G intron_variant
rs1000414874 -- 45,225,646(-) T/A/C intron_variant
rs1000634752 -- 45,242,252(-) A/C/G intron_variant
rs1000687591 -- 45,235,902(-) G/T intron_variant
rs1000781530 -- 45,242,949(-) A/C/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370190 Gene

Disorders for LOC105370190 Gene

No disorders were found for LOC105370190 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370190 Gene

Publications for LOC105370190 Gene

No publications were found for LOC105370190 Gene.

No data available for External Links for LOC105370190 Gene

Products for LOC105370190 Gene

Sources for LOC105370190 Gene

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