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Aliases for LOC105370185 Gene

Subcategory (RNA class) for LOC105370185 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370185 Gene

  • Uncharacterized LOC105370185 3

External Ids for LOC105370185 Gene

Previous GeneCards Identifiers for LOC105370185 Gene

  • GC13U901283

Summaries for LOC105370185 Gene

GeneCards Summary for LOC105370185 Gene

LOC105370185 (Uncharacterized LOC105370185) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370185 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370185 Gene

Genomics for LOC105370185 Gene

GeneHancer (GH) Regulatory Elements for LOC105370185 Gene

Promoters and enhancers for LOC105370185 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J044710 Promoter/Enhancer 2 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 +10.7 10731 6.8 PRDM1 ZNF680 ZNF560 ZNF704 ZNF547 POLR2A ZBTB8A PRDM12 ZNF639 SP1 TSC22D1 ENSG00000276527 COG3 GPALPP1 ERICH6B RN7SL49P TPT1-AS1 RCN1P2 SMARCE1P5 CCDC122
GH13J044725 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.7 -2.3 -2292 1.6 POLR2A LOC105370185 GC13P044655 LINC00330
GH13J044755 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -33.8 -33826 5.4 SP7 POLR2A PKNOX1 ZNF600 PRDM10 ZIC2 CEBPA ZSCAN4 ZNF639 ZNF629 LINC00330 TSC22D1 SMARCE1P5 LOC105370185 GC13P044655
GH13J044732 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -8.3 -8295 1 CEBPG CEBPA SOX13 CEBPB TCF7 RCOR1 MAZ FOXA2 EP300 TCF7L2 TPT1-AS1 LOC105370185 LINC00330 GC13P044655
GH13J044718 Enhancer 0.7 Ensembl ENCODE 0.7 +4.2 4210 3.4 POLR2A FOXA2 NR2F2 JUND TPT1-AS1 LOC105370185 ENSG00000276527 GC13P044655
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370185 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370185 Gene

Genomic Locations for LOC105370185 Gene
chr13:44,684,509-44,724,311
(GRCh38/hg38)
Size:
39,803 bases
Orientation:
Minus strand

Genomic View for LOC105370185 Gene

Genes around LOC105370185 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370185 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370185 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370185 Gene

Proteins for LOC105370185 Gene

Post-translational modifications for LOC105370185 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370185 Gene

Domains & Families for LOC105370185 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370185 Gene

Function for LOC105370185 Gene

Phenotypes From GWAS Catalog for LOC105370185 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370185 Gene

Localization for LOC105370185 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370185 Gene

Pathways & Interactions for LOC105370185 Gene

PathCards logo

SuperPathways for LOC105370185 Gene

No Data Available

Interacting Proteins for LOC105370185 Gene

Gene Ontology (GO) - Biological Process for LOC105370185 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370185 Gene

Drugs & Compounds for LOC105370185 Gene

No Compound Related Data Available

Transcripts for LOC105370185 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370185 Gene

No ASD Table

Relevant External Links for LOC105370185 Gene

GeneLoc Exon Structure for
LOC105370185

No data available for mRNA/cDNA for LOC105370185 Gene

Expression for LOC105370185 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370185 Gene

Orthologs for LOC105370185 Gene

No data available for Orthologs and Evolution for LOC105370185 Gene

Paralogs for LOC105370185 Gene

No data available for Paralogs for LOC105370185 Gene

Variants for LOC105370185 Gene

Sequence variations from dbSNP and Humsavar for LOC105370185 Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs1000024532 -- 44,698,189(-) T/C intron_variant
rs1000033114 -- 44,691,825(-) C/G intron_variant
rs1000122400 -- 44,705,969(-) A/C intron_variant
rs1000181188 -- 44,707,201(-) G/A/T intron_variant
rs1000211114 -- 44,702,950(-) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370185 Gene

Disorders for LOC105370185 Gene

No disorders were found for LOC105370185 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370185 Gene

Publications for LOC105370185 Gene

No publications were found for LOC105370185 Gene.

No data available for External Links for LOC105370185 Gene

Products for LOC105370185 Gene

Sources for LOC105370185 Gene

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