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Aliases for LOC105370170 Gene

Subcategory (RNA class) for LOC105370170 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370170 Gene

  • Uncharacterized LOC105370170 3

External Ids for LOC105370170 Gene

Previous GeneCards Identifiers for LOC105370170 Gene

  • GC13U901281

Summaries for LOC105370170 Gene

GeneCards Summary for LOC105370170 Gene

LOC105370170 (Uncharacterized LOC105370170) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370170 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370170 Gene

Genomics for LOC105370170 Gene

GeneHancer (GH) Regulatory Elements for LOC105370170 Gene

Promoters and enhancers for LOC105370170 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J039501 Enhancer 0.7 Ensembl ENCODE 600.7 -1.8 -1829 2.8 SP7 ZIC2 USF1 NR2F2 GLIS1 PRDM6 LOC105370170 GC13M039419 LHFPL6 GC13P039396
GH13J039505 Enhancer 0.6 Ensembl ENCODE 600.7 +1.3 1287 0.2 CEBPG POLR2A CEBPB LOC105370170 GC13M039525 GC13M039419 LHFPL6
GH13J039506 Enhancer 0.6 ENCODE 0.7 +3.1 3091 1.8 POLR2A ZNF561 SCRT2 ZBTB44 OSR2 SCRT1 ZNF213 ZNF24 LHFPL6 LOC105370170 GC13M039525 GC13M039419
GH13J039493 Enhancer 0.8 Ensembl ENCODE 0.4 -7.4 -7429 6.4 SP1 ZIC2 POLR2A SCRT2 EZH2 HNF4A ETS1 FEZF1 GLIS1 NANOG LOC105370170 GC13M039419 GC13P039396 LHFPL6
GH13J039516 Enhancer 0.8 Ensembl ENCODE 0.4 +11.5 11471 3 POLR2A ZBTB44 ZSCAN5C OSR2 RCOR1 GATA3 JUND FEZF1 ZNF843 PRDM6 LHFPL6 LOC105370170 GC13M039525 GC13M039419
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370170 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370170 Gene

Genomic Locations for LOC105370170 Gene
chr13:39,504,030-39,517,130
(GRCh38/hg38)
Size:
13,101 bases
Orientation:
Plus strand

Genomic View for LOC105370170 Gene

Genes around LOC105370170 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370170 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370170 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370170 Gene

Proteins for LOC105370170 Gene

Post-translational modifications for LOC105370170 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370170 Gene

Domains & Families for LOC105370170 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370170 Gene

Function for LOC105370170 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370170 Gene

Localization for LOC105370170 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370170 Gene

Pathways & Interactions for LOC105370170 Gene

PathCards logo

SuperPathways for LOC105370170 Gene

No Data Available

Interacting Proteins for LOC105370170 Gene

Gene Ontology (GO) - Biological Process for LOC105370170 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370170 Gene

Drugs & Compounds for LOC105370170 Gene

No Compound Related Data Available

Transcripts for LOC105370170 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370170 Gene

No ASD Table

Relevant External Links for LOC105370170 Gene

GeneLoc Exon Structure for
LOC105370170

No data available for mRNA/cDNA for LOC105370170 Gene

Expression for LOC105370170 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370170 Gene

Orthologs for LOC105370170 Gene

No data available for Orthologs and Evolution for LOC105370170 Gene

Paralogs for LOC105370170 Gene

No data available for Paralogs for LOC105370170 Gene

Variants for LOC105370170 Gene

Sequence variations from dbSNP and Humsavar for LOC105370170 Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs1000206896 -- 39,508,446(+) T/C intron_variant
rs1000273164 -- 39,513,947(+) T/C intron_variant
rs1000302823 -- 39,514,282(+) G/A/T intron_variant
rs1000575752 -- 39,508,163(+) T/C intron_variant
rs1001469129 -- 39,513,266(+) A/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370170 Gene

Disorders for LOC105370170 Gene

No disorders were found for LOC105370170 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370170 Gene

Publications for LOC105370170 Gene

No publications were found for LOC105370170 Gene.

No data available for External Links for LOC105370170 Gene

Products for LOC105370170 Gene

Sources for LOC105370170 Gene

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