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Aliases for LOC105370163 Gene

Subcategory (RNA class) for LOC105370163 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370163 Gene

  • Uncharacterized LOC105370163 3

External Ids for LOC105370163 Gene

Previous GeneCards Identifiers for LOC105370163 Gene

  • GC13U901398

Summaries for LOC105370163 Gene

GeneCards Summary for LOC105370163 Gene

LOC105370163 (Uncharacterized LOC105370163) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370163 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370163 Gene

Genomics for LOC105370163 Gene

GeneHancer (GH) Regulatory Elements for LOC105370163 Gene

Promoters and enhancers for LOC105370163 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J035855 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE 600.7 +0.2 154 4 SP1 SP7 PRDM1 ZNF639 POLR2A ZNF629 PATZ1 ZNF341 JUND OSR2 LOC105370163 DCLK1 GC13P036065
GH13J035888 Enhancer 0.7 Ensembl 0.3 +32.2 32164 1.6 SP7 MZF1 POLR2A ZEB2 ZNF629 ZNF561 ZBTB44 OSR2 ZBTB17 KLF8 LOC105370163 GC13P036065 DCLK1
GH13J035892 Enhancer 0.7 Ensembl ENCODE 0.3 +35.2 35210 1.3 POLR2A PRDM4 JUND ZNF660 FOS HLF BCL6B LOC105370163 GC13P036065 DCLK1
GH13J035851 Enhancer 0.5 Ensembl 0.4 -5.2 -5235 1.2 RFX1 ZSCAN4 BMI1 EGR2 GC13M035845 LOC105370163 DCLK1
GH13J035882 Enhancer 0.6 Ensembl 0.3 +26.2 26164 0.8 MZF1 PRDM10 ATF7 ZNF692 ATF2 ZFP69B ZNF366 FEZF1 KLF10 ZBTB21 LOC105370163 GC13P036065 DCLK1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370163 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370163 Gene

Genomic Locations for LOC105370163 Gene
chr13:35,856,836-35,904,240
(GRCh38/hg38)
Size:
47,405 bases
Orientation:
Plus strand

Genomic View for LOC105370163 Gene

Genes around LOC105370163 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370163 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370163 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370163 Gene

Proteins for LOC105370163 Gene

Post-translational modifications for LOC105370163 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370163 Gene

Domains & Families for LOC105370163 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370163 Gene

Function for LOC105370163 Gene

Phenotypes From GWAS Catalog for LOC105370163 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370163 Gene

Localization for LOC105370163 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370163 Gene

Pathways & Interactions for LOC105370163 Gene

PathCards logo

SuperPathways for LOC105370163 Gene

No Data Available

Interacting Proteins for LOC105370163 Gene

Gene Ontology (GO) - Biological Process for LOC105370163 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370163 Gene

Drugs & Compounds for LOC105370163 Gene

No Compound Related Data Available

Transcripts for LOC105370163 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370163 Gene

No ASD Table

Relevant External Links for LOC105370163 Gene

GeneLoc Exon Structure for
LOC105370163

No data available for mRNA/cDNA for LOC105370163 Gene

Expression for LOC105370163 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370163 Gene

Orthologs for LOC105370163 Gene

No data available for Orthologs and Evolution for LOC105370163 Gene

Paralogs for LOC105370163 Gene

No data available for Paralogs for LOC105370163 Gene

Variants for LOC105370163 Gene

Sequence variations from dbSNP and Humsavar for LOC105370163 Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs1000017260 -- 35,897,986(+) T/C intron_variant, non_coding_transcript_variant
rs1000101138 -- 35,860,828(+) G/A intron_variant
rs1000175300 -- 35,873,565(+) T/C intron_variant
rs1000291193 -- 35,873,809(+) C/A intron_variant
rs1000357286 -- 35,900,157(+) A/G genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370163 Gene

Disorders for LOC105370163 Gene

No disorders were found for LOC105370163 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370163 Gene

Publications for LOC105370163 Gene

No publications were found for LOC105370163 Gene.

No data available for External Links for LOC105370163 Gene

Products for LOC105370163 Gene

Sources for LOC105370163 Gene

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