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Aliases for LOC105370130 Gene

Subcategory (RNA class) for LOC105370130 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370130 Gene

  • Uncharacterized LOC105370130 3

External Ids for LOC105370130 Gene

Previous GeneCards Identifiers for LOC105370130 Gene

  • GC13U901172

Summaries for LOC105370130 Gene

GeneCards Summary for LOC105370130 Gene

LOC105370130 (Uncharacterized LOC105370130) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370130 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370130 Gene

Genomics for LOC105370130 Gene

GeneHancer (GH) Regulatory Elements for LOC105370130 Gene

Promoters and enhancers for LOC105370130 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J027901 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.7 -4.9 -4933 40.2 ELF3 PRDM1 ZNF547 PKNOX1 ZSCAN4 SOX13 MNT CEBPB EZH2 ZNF207 GSX1 PAN3 SNORA27 POLR1D PDX1 PLUT RPL21 LOC105370130 RNU6-73P
GH13J027917 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +16.3 16281 2.1 IKZF1 IKZF2 GATAD2A POLR2A SOX13 ZSCAN29 EZH2 RUNX3 BMI1 NR2F1 PDX1 PLUT LOC105370130
GH13J027829 Promoter/Enhancer 1.3 Ensembl ENCODE 0.2 -71.7 -71733 0.6 SP1 CC2D1A CTCF MLLT1 RAD21 ZBTB8A ZNF600 PRDM10 GATAD2A ZNF143 GC13P027834 RNU6-73P GSX1 LOC105370130 PLUT
GH13J027839 Enhancer 0.7 Ensembl 0.2 -61.1 -61121 1.8 MAFK PRDM1 CREB1 ZEB2 ZNF639 ZNF629 ZXDB NFE2 ZBTB48 BCL11A PDX1 PLUT GSX1 CDX2 RNU6-63P RNU6-73P LOC105370130
GH13J027868 Enhancer 0.4 ENCODE 0.3 -33.0 -32985 0.2 CTCF HNF4A ATF2 PDX1 PLUT GSX1 RNU6-63P LOC105370130 RNU6-73P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370130 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370130 Gene

Genomic Locations for LOC105370130 Gene
chr13:27,901,834-27,903,597
(GRCh38/hg38)
Size:
1,764 bases
Orientation:
Plus strand

Genomic View for LOC105370130 Gene

Genes around LOC105370130 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370130 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370130 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370130 Gene

Proteins for LOC105370130 Gene

Post-translational modifications for LOC105370130 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370130 Gene

Domains & Families for LOC105370130 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370130 Gene

Function for LOC105370130 Gene

Phenotypes From GWAS Catalog for LOC105370130 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370130 Gene

Localization for LOC105370130 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370130 Gene

Pathways & Interactions for LOC105370130 Gene

PathCards logo

SuperPathways for LOC105370130 Gene

No Data Available

Interacting Proteins for LOC105370130 Gene

Gene Ontology (GO) - Biological Process for LOC105370130 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370130 Gene

Drugs & Compounds for LOC105370130 Gene

No Compound Related Data Available

Transcripts for LOC105370130 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370130 Gene

No ASD Table

Relevant External Links for LOC105370130 Gene

GeneLoc Exon Structure for
LOC105370130

No data available for mRNA/cDNA for LOC105370130 Gene

Expression for LOC105370130 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370130 Gene

Orthologs for LOC105370130 Gene

No data available for Orthologs and Evolution for LOC105370130 Gene

Paralogs for LOC105370130 Gene

No data available for Paralogs for LOC105370130 Gene

Variants for LOC105370130 Gene

Sequence variations from dbSNP and Humsavar for LOC105370130 Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs1000233586 -- 27,903,667(+) C/T downstream_transcript_variant
rs1000392084 -- 27,903,023(+) G/A/C intron_variant
rs1001366818 -- 27,901,899(+) T/C non_coding_transcript_variant
rs1001741270 -- 27,904,008(+) G/A downstream_transcript_variant
rs1001796742 -- 27,901,629(+) C/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370130 Gene

Disorders for LOC105370130 Gene

No disorders were found for LOC105370130 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370130 Gene

Publications for LOC105370130 Gene

No publications were found for LOC105370130 Gene.

No data available for External Links for LOC105370130 Gene

Products for LOC105370130 Gene

Sources for LOC105370130 Gene

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