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Aliases for LOC105370117 Gene

Subcategory (RNA class) for LOC105370117 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370117 Gene

  • Uncharacterized LOC105370117 3

External Ids for LOC105370117 Gene

Previous GeneCards Identifiers for LOC105370117 Gene

  • GC13U901213

Summaries for LOC105370117 Gene

GeneCards Summary for LOC105370117 Gene

LOC105370117 (Uncharacterized LOC105370117) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370117 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370117 Gene

Genomics for LOC105370117 Gene

GeneHancer (GH) Regulatory Elements for LOC105370117 Gene

Promoters and enhancers for LOC105370117 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J024502 Enhancer 0.6 ENCODE 600.7 +0.7 678 1.4 IKZF1 PKNOX1 FOXA2 SAP130 FOSL1 ZNF189 DPF2 JUND NFE2 FOS LOC105370117 PARP4 C1QTNF9 TPTE2P6
GH13J024500 Enhancer 0.4 ENCODE 600.7 -1.3 -1306 1.6 NFIC JUND CBFA2T3 LOC105370117 PARP4 TPTE2P6
GH13J024511 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.4 +9.7 9660 3.6 ZFX ELF3 ZKSCAN8 ZNF148 NKRF POLR2A MLLT1 CEBPG ZSCAN21 MAFK PARP4 MIPEP LOC105370117 TPTE2P6
GH13J024505 Enhancer 0.7 ENCODE 0.7 +3.4 3352 1 MLLT1 SMARCA4 HDAC1 NR2C1 EP300 SOX6 CTBP1 NR2C2 NFIC CUX1 PARP4 LOC105370117 TPTE2P6
GH13J024495 Enhancer 0.4 ENCODE 0.4 -7.0 -7003 0.2 CTBP1 DPF2 ZNF217 LOC105370117 PARP4 TPTE2P6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370117 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370117 Gene

Genomic Locations for LOC105370117 Gene
chr13:24,502,341-24,529,087
(GRCh38/hg38)
Size:
26,747 bases
Orientation:
Plus strand

Genomic View for LOC105370117 Gene

Genes around LOC105370117 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370117 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370117 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370117 Gene

Proteins for LOC105370117 Gene

Post-translational modifications for LOC105370117 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370117 Gene

Domains & Families for LOC105370117 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370117 Gene

Function for LOC105370117 Gene

Phenotypes From GWAS Catalog for LOC105370117 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370117 Gene

Localization for LOC105370117 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370117 Gene

Pathways & Interactions for LOC105370117 Gene

PathCards logo

SuperPathways for LOC105370117 Gene

No Data Available

Interacting Proteins for LOC105370117 Gene

Gene Ontology (GO) - Biological Process for LOC105370117 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370117 Gene

Drugs & Compounds for LOC105370117 Gene

No Compound Related Data Available

Transcripts for LOC105370117 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370117 Gene

No ASD Table

Relevant External Links for LOC105370117 Gene

GeneLoc Exon Structure for
LOC105370117

No data available for mRNA/cDNA for LOC105370117 Gene

Expression for LOC105370117 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370117 Gene

Orthologs for LOC105370117 Gene

No data available for Orthologs and Evolution for LOC105370117 Gene

Paralogs for LOC105370117 Gene

No data available for Paralogs for LOC105370117 Gene

Variants for LOC105370117 Gene

Sequence variations from dbSNP and Humsavar for LOC105370117 Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs1000080370 -- 24,522,224(+) C/T intron_variant
rs1000095537 -- 24,516,314(+) A/G intron_variant
rs1000178699 -- 24,521,964(+) G/C intron_variant
rs1000254601 -- 24,528,243(+) A/G intron_variant
rs1000685640 -- 24,504,847(+) T/A/C genic_upstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370117 Gene

Disorders for LOC105370117 Gene

No disorders were found for LOC105370117 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370117 Gene

Publications for LOC105370117 Gene

No publications were found for LOC105370117 Gene.

No data available for External Links for LOC105370117 Gene

Products for LOC105370117 Gene

Sources for LOC105370117 Gene

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