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Aliases for LOC105370087 Gene

Subcategory (RNA class) for LOC105370087 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370087 Gene

  • Uncharacterized LOC105370087 3

External Ids for LOC105370087 Gene

Previous GeneCards Identifiers for LOC105370087 Gene

  • GC12U902015

Summaries for LOC105370087 Gene

GeneCards Summary for LOC105370087 Gene

LOC105370087 (Uncharacterized LOC105370087) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370087 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370087 Gene

Genomics for LOC105370087 Gene

GeneHancer (GH) Regulatory Elements for LOC105370087 Gene

Promoters and enhancers for LOC105370087 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J131681 Enhancer 0.7 ENCODE 0.7 +4.6 4593 0.4 SP1 ZNF148 LEF1 HDAC1 ZNF692 SP2 NFE2 POLR2A MBD2 MAFG LOC105370087 SFSWAP
GH12J131682 Enhancer 0.7 ENCODE 0.4 +5.1 5063 0.3 GTF2F1 MLLT1 CREB1 ATF7 NKRF HDGF EHMT2 FOXK2 ATF2 USF1 SFSWAP DDX51 EP400 ENSG00000249926 LOC105370087
GH12J131696 Enhancer 0.5 Ensembl 0.3 +20.6 20593 3 MAFK PKNOX1 ZNF316 NFE2 EMSY ENSG00000249926 LOC101928416 SFSWAP LOC105370087
GH12J131705 Enhancer 0.4 Ensembl 0.3 +28.0 27993 1 ZNF580 ZNF146 SFSWAP LOC105370087
GH12J131702 Enhancer 0.3 Ensembl 0.3 +25.1 25093 0.8 CTCF MMP17 SFSWAP LOC105370087
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370087 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370087 Gene

Genomic Locations for LOC105370087 Gene
chr12:131,677,708-131,681,053
(GRCh38/hg38)
Size:
3,346 bases
Orientation:
Plus strand

Genomic View for LOC105370087 Gene

Genes around LOC105370087 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370087 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370087 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370087 Gene

Proteins for LOC105370087 Gene

Post-translational modifications for LOC105370087 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370087 Gene

Domains & Families for LOC105370087 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370087 Gene

Function for LOC105370087 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370087 Gene

Localization for LOC105370087 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370087 Gene

Pathways & Interactions for LOC105370087 Gene

PathCards logo

SuperPathways for LOC105370087 Gene

No Data Available

Interacting Proteins for LOC105370087 Gene

Gene Ontology (GO) - Biological Process for LOC105370087 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370087 Gene

Drugs & Compounds for LOC105370087 Gene

No Compound Related Data Available

Transcripts for LOC105370087 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370087 Gene

No ASD Table

Relevant External Links for LOC105370087 Gene

GeneLoc Exon Structure for
LOC105370087

No data available for mRNA/cDNA for LOC105370087 Gene

Expression for LOC105370087 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370087 Gene

Orthologs for LOC105370087 Gene

No data available for Orthologs and Evolution for LOC105370087 Gene

Paralogs for LOC105370087 Gene

No data available for Paralogs for LOC105370087 Gene

Variants for LOC105370087 Gene

Sequence variations from dbSNP and Humsavar for LOC105370087 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000528731 -- 131,680,203(+) A/C intron_variant, non_coding_transcript_variant
rs1000583525 -- 131,686,537(+) C/T genic_downstream_transcript_variant, intron_variant
rs1000985683 -- 131,679,880(+) G/A intron_variant, non_coding_transcript_variant
rs1001182360 -- 131,684,631(+) T/C genic_downstream_transcript_variant, intron_variant
rs1001215511 -- 131,680,446(+) G/A intron_variant, non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370087 Gene

Disorders for LOC105370087 Gene

No disorders were found for LOC105370087 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370087 Gene

Publications for LOC105370087 Gene

No publications were found for LOC105370087 Gene.

No data available for External Links for LOC105370087 Gene

Products for LOC105370087 Gene

Sources for LOC105370087 Gene

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