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Aliases for LOC105370082 Gene

Subcategory (RNA class) for LOC105370082 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370082 Gene

  • Uncharacterized LOC105370082 3

External Ids for LOC105370082 Gene

Previous GeneCards Identifiers for LOC105370082 Gene

  • GC12U902259

Summaries for LOC105370082 Gene

GeneCards Summary for LOC105370082 Gene

LOC105370082 (Uncharacterized LOC105370082) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370082 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370082 Gene

Genomics for LOC105370082 Gene

GeneHancer (GH) Regulatory Elements for LOC105370082 Gene

Promoters and enhancers for LOC105370082 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J131266 Enhancer 0.9 Ensembl dbSUPER 600.7 +0.3 277 1.2 MAFK SMARCA4 IKZF1 ATF1 NRF1 ZNF316 MGA NFE2 GATAD2A MAFG LOC105370082 ENSG00000280217
GH12J131242 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 +25.6 25558 1.1 SP1 CC2D1A SIX5 CBFA2T2 NFRKB YY1 TRIM24 GMEB1 IKZF1 ATF1 EP400 SFSWAP EP400P1 ENSG00000255933 ENSG00000256299 LINC01257 ENSG00000280217 LOC105370082
GH12J131233 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +32.9 32919 4.5 NFIB NCOA3 TRIM24 SMARCA4 MTA1 CREB1 DPF2 IKZF1 RFX1 PKNOX1 ENSG00000280217 NOC4L ENSG00000255933 EP400 LINC01257 ENSG00000256250 RPS6P20 LOC105370082
GH12J131249 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 +18.9 18877 0.4 ELF1 REST SP1 FOSL2 KDM1A GFI1B ENSG00000280217 LOC105370082
GH12J131283 Enhancer 0.7 dbSUPER 0.4 -16.5 -16473 3.3 CDC5L MCM2 CREB1 CTBP1 GTF2F1 MGA PHB2 ZKSCAN1 MCM3 EHMT2 NOC4L EP400 EP400P1 SFSWAP ENSG00000249926 RPS6P20 LOC105370082
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370082 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370082 Gene

Genomic Locations for LOC105370082 Gene
chr12:131,237,947-131,268,678
(GRCh38/hg38)
Size:
30,732 bases
Orientation:
Minus strand

Genomic View for LOC105370082 Gene

Genes around LOC105370082 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370082 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370082 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370082 Gene

Proteins for LOC105370082 Gene

Post-translational modifications for LOC105370082 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370082 Gene

Domains & Families for LOC105370082 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370082 Gene

Function for LOC105370082 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370082 Gene

Localization for LOC105370082 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370082 Gene

Pathways & Interactions for LOC105370082 Gene

PathCards logo

SuperPathways for LOC105370082 Gene

No Data Available

Interacting Proteins for LOC105370082 Gene

Gene Ontology (GO) - Biological Process for LOC105370082 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370082 Gene

Drugs & Compounds for LOC105370082 Gene

No Compound Related Data Available

Transcripts for LOC105370082 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370082 Gene

No ASD Table

Relevant External Links for LOC105370082 Gene

GeneLoc Exon Structure for
LOC105370082

No data available for mRNA/cDNA for LOC105370082 Gene

Expression for LOC105370082 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370082 Gene

Orthologs for LOC105370082 Gene

No data available for Orthologs and Evolution for LOC105370082 Gene

Paralogs for LOC105370082 Gene

No data available for Paralogs for LOC105370082 Gene

Variants for LOC105370082 Gene

Sequence variations from dbSNP and Humsavar for LOC105370082 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000053475 -- 131,266,291(-) AAAA/AA genic_upstream_transcript_variant, intron_variant
rs1000228911 -- 131,261,306(-) C/T intron_variant
rs1000230744 -- 131,255,178(-) C/T intron_variant
rs1000411394 -- 131,245,680(-) G/A/T intron_variant
rs1000460446 -- 131,245,565(-) C/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370082 Gene

Disorders for LOC105370082 Gene

No disorders were found for LOC105370082 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370082 Gene

Publications for LOC105370082 Gene

No publications were found for LOC105370082 Gene.

No data available for External Links for LOC105370082 Gene

Products for LOC105370082 Gene

Sources for LOC105370082 Gene

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