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Aliases for LOC105370050 Gene

Subcategory (RNA class) for LOC105370050 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370050 Gene

  • Uncharacterized LOC105370050 3

External Ids for LOC105370050 Gene

Previous GeneCards Identifiers for LOC105370050 Gene

  • GC12U902273

Summaries for LOC105370050 Gene

GeneCards Summary for LOC105370050 Gene

LOC105370050 (Uncharacterized LOC105370050) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370050 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370050 Gene

Genomics for LOC105370050 Gene

GeneHancer (GH) Regulatory Elements for LOC105370050 Gene

Promoters and enhancers for LOC105370050 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J124865 Enhancer 0.8 ENCODE dbSUPER 600.7 +0.2 196 0.9 PRDM1 ZBTB8A ZNF217 GATA3 FOXA1 ZSCAN16 ZNF687 ZNF24 MNT LOC105370050 SCARB1
GH12J124861 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.7 -2.2 -2155 3.7 SP1 ZFX MNT ZNF148 NKRF POLR2A MLLT1 ZNF121 GTF2F1 ZNF687 SCARB1 UBC RFLNA LOC105370050 GC12P124823
GH12J124866 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 0.7 +3.0 3018 3.6 ZKSCAN8 MLLT1 ZNF121 GTF2F1 CSDE1 BACH1 MAFK TRIM24 SP1 PRDM1 DHX37 NCOR2 SCARB1 LOC105370050
GH12J124850 Enhancer 1.2 ENCODE dbSUPER 0.4 -11.5 -11536 6.6 ELF3 CEBPG RERE AHR TFE3 SP1 HNF1A PPARG SP5 ZNF384 SCARB1 UBC RFLNA LOC105370050 GC12P124823
GH12J124831 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.3 -29.9 -29919 8 HDGF SP1 ELF3 MNT ZNF121 CEBPG NFIB ZSCAN21 NCOA3 ZNF24 SCARB1 BRI3BP ENSG00000214650 GC12P124823 LOC105370050
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370050 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370050 Gene

Genomic Locations for LOC105370050 Gene
chr12:124,865,519-124,877,917
(GRCh38/hg38)
Size:
12,399 bases
Orientation:
Plus strand

Genomic View for LOC105370050 Gene

Genes around LOC105370050 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370050 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370050 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370050 Gene

Proteins for LOC105370050 Gene

Post-translational modifications for LOC105370050 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370050 Gene

Domains & Families for LOC105370050 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370050 Gene

Function for LOC105370050 Gene

Phenotypes From GWAS Catalog for LOC105370050 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370050 Gene

Localization for LOC105370050 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370050 Gene

Pathways & Interactions for LOC105370050 Gene

PathCards logo

SuperPathways for LOC105370050 Gene

No Data Available

Interacting Proteins for LOC105370050 Gene

Gene Ontology (GO) - Biological Process for LOC105370050 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370050 Gene

Drugs & Compounds for LOC105370050 Gene

No Compound Related Data Available

Transcripts for LOC105370050 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370050 Gene

No ASD Table

Relevant External Links for LOC105370050 Gene

GeneLoc Exon Structure for
LOC105370050

No data available for mRNA/cDNA for LOC105370050 Gene

Expression for LOC105370050 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370050 Gene

Orthologs for LOC105370050 Gene

No data available for Orthologs and Evolution for LOC105370050 Gene

Paralogs for LOC105370050 Gene

No data available for Paralogs for LOC105370050 Gene

Variants for LOC105370050 Gene

Sequence variations from dbSNP and Humsavar for LOC105370050 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000035702 -- 124,874,986(+) G/A intron_variant
rs1000142389 -- 124,872,251(+) G/A intron_variant
rs1000178869 -- 124,872,488(+) G/A intron_variant
rs1000187868 -- 124,868,236(+) T/C intron_variant
rs1000413869 -- 124,871,672(+) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370050 Gene

Disorders for LOC105370050 Gene

No disorders were found for LOC105370050 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370050 Gene

Publications for LOC105370050 Gene

No publications were found for LOC105370050 Gene.

No data available for External Links for LOC105370050 Gene

Products for LOC105370050 Gene

Sources for LOC105370050 Gene

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